Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
HFM1A2PYH4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
HFM1A2PYH4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC28.9■■■□□ 2.22
HFM1A2PYH4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
HFM1A2PYH4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC28.9■■■□□ 2.22
HFM1A2PYH4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC28.9■■■□□ 2.22
HFM1A2PYH4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
HFM1A2PYH4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC28.9■■■□□ 2.22
HFM1A2PYH4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
HFM1A2PYH4 CYP2D8P-201ENST00000433633 1490 ntBASIC28.89■■■□□ 2.22
HFM1A2PYH4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC28.89■■■□□ 2.22
HFM1A2PYH4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC28.89■■■□□ 2.22
HFM1A2PYH4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
HFM1A2PYH4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC28.89■■■□□ 2.22
HFM1A2PYH4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC28.89■■■□□ 2.22
HFM1A2PYH4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
HFM1A2PYH4 AC010947.1-201ENST00000623454 693 ntBASIC28.89■■■□□ 2.22
HFM1A2PYH4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC28.89■■■□□ 2.22
HFM1A2PYH4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
HFM1A2PYH4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC28.89■■■□□ 2.22
HFM1A2PYH4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC28.89■■■□□ 2.21
HFM1A2PYH4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC28.89■■■□□ 2.21
HFM1A2PYH4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.21
HFM1A2PYH4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
HFM1A2PYH4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC28.88■■■□□ 2.21
HFM1A2PYH4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC28.88■■■□□ 2.21
HFM1A2PYH4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC28.88■■■□□ 2.21
HFM1A2PYH4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC28.88■■■□□ 2.21
HFM1A2PYH4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC28.88■■■□□ 2.21
HFM1A2PYH4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC28.88■■■□□ 2.21
HFM1A2PYH4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC28.88■■■□□ 2.21
HFM1A2PYH4 AC145285.6-201ENST00000604632 637 ntBASIC28.88■■■□□ 2.21
HFM1A2PYH4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC28.88■■■□□ 2.21
HFM1A2PYH4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HFM1A2PYH4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
HFM1A2PYH4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
HFM1A2PYH4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
HFM1A2PYH4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
HFM1A2PYH4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
HFM1A2PYH4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC28.87■■■□□ 2.21
HFM1A2PYH4 FAM207BP-201ENST00000447172 505 ntBASIC28.86■■■□□ 2.21
HFM1A2PYH4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC28.86■■■□□ 2.21
HFM1A2PYH4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC28.86■■■□□ 2.21
HFM1A2PYH4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
HFM1A2PYH4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC28.86■■■□□ 2.21
HFM1A2PYH4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
HFM1A2PYH4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
HFM1A2PYH4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC28.86■■■□□ 2.21
HFM1A2PYH4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
HFM1A2PYH4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC28.86■■■□□ 2.21
HFM1A2PYH4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
HFM1A2PYH4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
HFM1A2PYH4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
HFM1A2PYH4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC28.86■■■□□ 2.21
HFM1A2PYH4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
HFM1A2PYH4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC28.86■■■□□ 2.21
HFM1A2PYH4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
HFM1A2PYH4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
HFM1A2PYH4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
HFM1A2PYH4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
HFM1A2PYH4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
HFM1A2PYH4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
HFM1A2PYH4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC28.85■■■□□ 2.21
HFM1A2PYH4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
HFM1A2PYH4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
HFM1A2PYH4 PWWP2AP1-201ENST00000429776 2273 ntBASIC28.85■■■□□ 2.21
HFM1A2PYH4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
HFM1A2PYH4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
HFM1A2PYH4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC28.85■■■□□ 2.21
HFM1A2PYH4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HFM1A2PYH4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC28.84■■■□□ 2.21
HFM1A2PYH4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
HFM1A2PYH4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms