Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 AC098590.1-201ENST00000468126 897 ntBASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC194A0A1B0GVG4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 TMEM191A-211ENST00000637163 1067 ntBASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC194A0A1B0GVG4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCDC194A0A1B0GVG4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC194A0A1B0GVG4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 GCSHP5-201ENST00000443090 522 ntBASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 AL158047.1-201ENST00000445918 881 ntBASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 C1QL1P1-201ENST00000568105 661 ntBASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.25■■□□□ 1.15
CCDC194A0A1B0GVG4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC194A0A1B0GVG4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC194A0A1B0GVG4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CCDC194A0A1B0GVG4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC194A0A1B0GVG4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC194A0A1B0GVG4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms