Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 AP001271.2-201ENST00000624018 1556 ntBASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 KRT8P41-201ENST00000533985 1514 ntBASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC163A0A0D9SF12 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC163A0A0D9SF12 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC163A0A0D9SF12 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 LINC01311-201ENST00000565162 1445 ntBASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms