Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC7A5P1-201ENST00000568957 537 ntBASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 TCF3P1-201ENST00000423021 1937 ntBASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV8-6A0A0B4J262 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 FP700111.2-201ENST00000619190 1892 ntBASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 AL162430.1-201ENST00000480705 870 ntBASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC7A5P2-201ENST00000553010 536 ntBASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TRAV8-6A0A0B4J262 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms