Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 AL049812.1-201ENST00000432563 2267 ntBASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 AL390719.1-204ENST00000412397 1219 ntBASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 AC005829.2-201ENST00000571422 1056 ntBASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV3A0A0B4J244 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 AL161938.1-201ENST00000569833 2180 ntBASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 TEX21P-204ENST00000641479 1693 ntBASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 AC083906.2-201ENST00000511578 360 ntBASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV3A0A0B4J244 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.64■□□□□ 0.1
TRAV3A0A0B4J244 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV3A0A0B4J244 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms