Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AC018470.1-201ENST00000624790 3129 ntBASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AC005332.8-201ENST00000622750 2735 ntBASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 HLA-G-202ENST00000376815 851 ntBASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 HLA-G-203ENST00000376818 1127 ntBASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AC009113.1-201ENST00000570267 2443 ntBASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MCRIP2P1-201ENST00000394346 511 ntBASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 LETM1P2-201ENST00000597330 2178 ntBASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms