Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 PCDHB18P-201ENST00000524813 2368 ntBASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 LTB4R2-202ENST00000528054 3092 ntBASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-7A0A0A0MS04 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 AP000997.3-201ENST00000623333 2250 ntBASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 KRT17P1-201ENST00000399211 1546 ntBASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC104581.1-202ENST00000635932 2618 ntBASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-7A0A0A0MS04 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms