Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC107918.3-201ENST00000533272 382 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 ZNF321P-202ENST00000550843 495 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 MTCO2P22-201ENST00000603246 681 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 SUMO2P14-201ENST00000604488 293 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AL359513.1-201ENST00000614364 557 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AC009090.3-201ENST00000616553 565 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 SAMMSON-209ENST00000641222 1100 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 STX3-208ENST00000641815 3236 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AL132640.2-201ENST00000559968 1698 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 SKINT1L-201ENST00000401057 817 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 ATF1P1-201ENST00000406040 927 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 RPS26P13-201ENST00000419030 330 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AL513175.2-201ENST00000422071 443 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 TMX2P1-201ENST00000436507 708 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AL353898.1-201ENST00000444055 238 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC105399.1-202ENST00000447303 205 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AL096803.2-201ENST00000450032 677 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 RN7SKP99-201ENST00000517028 307 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 MTCYBP28-201ENST00000566728 1132 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 PIGPP4-201ENST00000584447 307 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC061975.8-201ENST00000587058 721 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC015726.1-201ENST00000602353 681 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC023813.4-201ENST00000607580 580 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC000068.2-201ENST00000608816 460 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC005840.5-201ENST00000619166 599 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 MIR6837-201ENST00000620884 64 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 AC011933.2-201ENST00000578539 2790 ntBASIC5.54□□□□□ -1.52
DKK3Q9UBP4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.54□□□□□ -1.52
DKK3Q9UBP4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 RNA5SP183-201ENST00000362452 119 ntBASIC5.53□□□□□ -1.52
DKK3Q9UBP4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.53□□□□□ -1.52
DKK3Q9UBP4 RNU4-74P-201ENST00000411280 161 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms