Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC004076.2-201ENST00000620532 3323 ntBASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 TTLL5-221ENST00000557636 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ZSCAN2-204ENST00000358472 3231 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 KCNE1-209ENST00000621601 3148 ntAPPRIS P1 TSL 4 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 NXF5-207ENST00000537026 1991 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF133-215ENST00000630056 1999 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 GALNT11-208ENST00000434507 2747 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 AL023806.3-201ENST00000638502 2704 ntBASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 DDX10P2-201ENST00000417796 2614 ntBASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 AP003355.2-201ENST00000605923 2622 ntBASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 ACSL6-203ENST00000379240 2548 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 C1orf74-201ENST00000294811 4684 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 CXorf36-202ENST00000398000 4655 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 AC074043.1-201ENST00000483126 1776 ntBASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 GDPD2-202ENST00000453994 2438 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 ACOX2-202ENST00000459701 2348 ntTSL 5 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC35A4-202ENST00000514199 3617 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 SEMA6A-201ENST00000257414 4256 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF615-215ENST00000618487 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 IFT46-207ENST00000530872 1566 ntTSL 5 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 MSH3-201ENST00000265081 4092 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 SEMA3F-AS1-202ENST00000437204 2755 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 PKD1L3-201ENST00000620267 5199 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC22A11-201ENST00000301891 3860 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 AC073133.2-201ENST00000436670 2698 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 AC138951.1-201ENST00000502532 2685 ntBASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 DNM1L-230ENST00000553257 2699 ntTSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC1.9□□□□□ -2.1
KRTAP4-4Q9BYR3 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 OR13A1-201ENST00000374401 2574 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TPCN1-202ENST00000392569 2558 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02069-201ENST00000457449 2591 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ASTN1-204ENST00000424564 3685 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CES5A-204ENST00000520435 1948 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 APOL1-202ENST00000397278 2918 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AC023934.1-201ENST00000574529 2389 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CD59-213ENST00000533403 1847 ntTSL 3 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AL080312.1-201ENST00000256654 824 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 MT2P1-201ENST00000262499 183 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 LIN37-201ENST00000301159 1150 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 OR56B3P-201ENST00000316517 947 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SERHL2-202ENST00000335879 753 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SPANXC-201ENST00000358993 387 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-222P-201ENST00000362438 107 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP150-201ENST00000362969 119 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SKP180-201ENST00000363913 330 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SKP134-201ENST00000363960 269 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms