Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 RN7SKP229-201ENST00000410465 302 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AL451139.1-201ENST00000434718 346 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 NMNAT1P2-201ENST00000435192 860 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 PRPF38AP2-201ENST00000438179 851 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 MTCO3P43-201ENST00000440974 771 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 HMGB3P9-201ENST00000441799 583 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 EEF1B2P5-201ENST00000444820 548 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC073850.1-201ENST00000449243 255 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 RHEBP2-201ENST00000450289 600 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 OTX2P1-201ENST00000450956 354 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC005532.2-201ENST00000467154 373 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC073358.1-201ENST00000505671 684 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 RN7SKP46-201ENST00000515942 234 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 HMGB1P46-201ENST00000520062 610 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AL049839.1-201ENST00000556151 657 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC087477.6-201ENST00000559595 843 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC023158.1-201ENST00000561632 1025 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 MIR6862-1-201ENST00000613016 70 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 MIR6862-2-201ENST00000614755 70 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 MIR8069-1-201ENST00000616627 86 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 MIR8069-2-201ENST00000621412 86 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AC119674.1-212ENST00000641155 993 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 HSPA8P18-201ENST00000439846 1928 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 AL136164.3-201ENST00000624429 3978 ntBASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF3IP1Q8TDR0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 RNU4-4P-201ENST00000364588 130 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC092642.1-201ENST00000392417 425 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 U3.35-201ENST00000408405 208 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 RN7SKP213-201ENST00000410746 298 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 E2F6P2-201ENST00000420708 748 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC012519.1-201ENST00000424588 610 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 FAR1P1-201ENST00000427163 934 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 ZNF965P-201ENST00000432501 817 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC004938.1-201ENST00000438468 308 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 MRPL48P1-201ENST00000445390 636 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 SLC25A18P1-201ENST00000449385 454 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 MYO5BP2-201ENST00000449815 1277 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 CYCSP34-201ENST00000458172 304 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 snoU13.20-201ENST00000459180 104 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC089999.1-201ENST00000460336 374 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 BX284632.1-201ENST00000478218 541 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 RN7SL346P-201ENST00000491561 294 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 RN7SL558P-201ENST00000497468 299 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 CDH12P2-201ENST00000504393 298 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC147055.3-201ENST00000510547 851 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 MTND2P31-201ENST00000512602 616 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 snoU109.6-201ENST00000516831 118 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AF186190.1-201ENST00000517470 480 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC040174.2-201ENST00000602701 465 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AC010424.2-201ENST00000607594 443 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AL355802.4-201ENST00000607635 548 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 MIR6886-201ENST00000619864 61 ntBASIC5.02□□□□□ -1.61
TRAF3IP1Q8TDR0 AL356490.1-201ENST00000623079 479 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms