Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.56□□□□□ -1.04
ATN1P54259 RNU6-861P-201ENST00000516745 106 ntBASIC8.56□□□□□ -1.04
ATN1P54259 SCARNA11.1-201ENST00000516918 132 ntBASIC8.56□□□□□ -1.04
ATN1P54259 AP000648.1-201ENST00000529682 397 ntBASIC8.56□□□□□ -1.04
ATN1P54259 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC8.56□□□□□ -1.04
ATN1P54259 AC092121.1-201ENST00000569452 202 ntBASIC8.56□□□□□ -1.04
ATN1P54259 NDUFB9P1-201ENST00000604683 510 ntBASIC8.56□□□□□ -1.04
ATN1P54259 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.56□□□□□ -1.04
ATN1P54259 MIR6127-201ENST00000614019 109 ntBASIC8.56□□□□□ -1.04
ATN1P54259 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.56□□□□□ -1.04
ATN1P54259 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.56□□□□□ -1.04
ATN1P54259 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
ATN1P54259 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATN1P54259 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.56□□□□□ -1.04
ATN1P54259 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 CAP1P2-201ENST00000417455 1409 ntBASIC8.55□□□□□ -1.04
ATN1P54259 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.55□□□□□ -1.04
ATN1P54259 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.55□□□□□ -1.04
ATN1P54259 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 HSPE1P11-201ENST00000339579 310 ntBASIC8.55□□□□□ -1.04
ATN1P54259 Y_RNA.54-201ENST00000362766 105 ntBASIC8.55□□□□□ -1.04
ATN1P54259 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 RNU1-11P-201ENST00000383975 164 ntBASIC8.55□□□□□ -1.04
ATN1P54259 SNORA41-201ENST00000384675 132 ntBASIC8.55□□□□□ -1.04
ATN1P54259 RNA5SP177-201ENST00000410122 107 ntBASIC8.55□□□□□ -1.04
ATN1P54259 RNU2-25P-201ENST00000411041 191 ntBASIC8.55□□□□□ -1.04
ATN1P54259 YWHAZP3-201ENST00000415292 738 ntBASIC8.55□□□□□ -1.04
ATN1P54259 RPL24P2-201ENST00000421023 475 ntBASIC8.55□□□□□ -1.04
ATN1P54259 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 RPS20P32-201ENST00000456044 356 ntBASIC8.55□□□□□ -1.04
ATN1P54259 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 LINC01399-202ENST00000458450 244 ntBASIC8.55□□□□□ -1.04
ATN1P54259 RN7SL55P-201ENST00000464534 297 ntBASIC8.55□□□□□ -1.04
ATN1P54259 RN7SL836P-201ENST00000476140 296 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC104687.1-201ENST00000485829 412 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC034222.1-201ENST00000494052 532 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC8.55□□□□□ -1.04
ATN1P54259 AC008716.1-201ENST00000511084 513 ntBASIC8.55□□□□□ -1.04
ATN1P54259 OR51A1P-201ENST00000511110 946 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.55□□□□□ -1.04
ATN1P54259 AC087257.2-201ENST00000538759 928 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC8.55□□□□□ -1.04
ATN1P54259 RPA2P1-201ENST00000556557 721 ntBASIC8.55□□□□□ -1.04
ATN1P54259 UBE2CP1-201ENST00000557130 554 ntBASIC8.55□□□□□ -1.04
ATN1P54259 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC8.55□□□□□ -1.04
ATN1P54259 AL356432.3-201ENST00000568952 465 ntBASIC8.55□□□□□ -1.04
ATN1P54259 MIR4775-201ENST00000581168 75 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 AC092747.3-201ENST00000603769 301 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC011891.2-201ENST00000604949 397 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC123768.4-201ENST00000616244 701 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC026108.1-201ENST00000635444 547 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AL034408.1-201ENST00000637712 664 ntBASIC8.55□□□□□ -1.04
ATN1P54259 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
ATN1P54259 MKI67P1-201ENST00000604297 1460 ntBASIC8.55□□□□□ -1.04
ATN1P54259 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.55□□□□□ -1.04
ATN1P54259 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 CUBNP1-201ENST00000412710 1790 ntBASIC8.55□□□□□ -1.04
ATN1P54259 AC090017.1-201ENST00000548612 1779 ntBASIC8.55□□□□□ -1.04
ATN1P54259 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATN1P54259 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
ATN1P54259 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.55□□□□□ -1.04
ATN1P54259 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms