Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RN7SL831P-201ENST00000460344 319 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL292P-201ENST00000473305 266 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL756P-201ENST00000488739 268 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL813P-201ENST00000489529 283 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AC097467.2-201ENST00000502884 346 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 SCARNA20-201ENST00000516768 131 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 IGHV3-25-201ENST00000518224 351 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AC040970.1-201ENST00000520885 483 ntTSL 2 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AC131025.1-201ENST00000521756 588 ntTSL 3 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AC018442.3-201ENST00000523025 183 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 TMEM262-206ENST00000530719 494 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 CLCF1-202ENST00000533438 967 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 MYL6B-207ENST00000550443 1034 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 COPZ1-214ENST00000552218 797 ntTSL 5 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 KHNYN-203ENST00000554268 760 ntTSL 3 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AC006435.2-202ENST00000573007 442 ntTSL 3 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 MIR5193-201ENST00000584510 109 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 MIR4294-201ENST00000584548 76 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF544-204ENST00000595981 895 ntTSL 3 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AL591034.3-201ENST00000605511 685 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 MIR941-1-201ENST00000636396 72 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AC100788.2-201ENST00000625199 2889 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 PIEZO1P2-201ENST00000416241 2180 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 EPHB1-211ENST00000493838 2786 ntTSL 2 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 TNNT2-224ENST00000509001 1330 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AL158071.4-201ENST00000608358 4125 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 FANCF-201ENST00000327470 4269 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 OLFM5P-201ENST00000411807 1478 ntBASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 SEPT4-206ENST00000457347 1795 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF596-202ENST00000320552 2696 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP3-3Q9BYR6 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 GP2-203ENST00000381360 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF30-204ENST00000601142 2280 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 PCDHGB6-201ENST00000520790 4599 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 MSRB3-201ENST00000308259 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 ME1-201ENST00000369705 3371 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 OGFOD1-207ENST00000566157 4647 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 GTF3C2-201ENST00000264720 3882 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 APPL2-213ENST00000551662 2190 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF195-204ENST00000354599 2970 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 NMNAT1-201ENST00000377205 3781 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 CST4-201ENST00000217423 751 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 H3F3AP6-201ENST00000230495 411 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 C20orf173-201ENST00000246199 1034 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 FOLR2-201ENST00000298223 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 LY6D-201ENST00000301263 804 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 CD79B-202ENST00000349817 378 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 Y_RNA.298-201ENST00000364960 107 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 H3F3AP4-201ENST00000369387 411 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 C20orf173-202ENST00000374345 985 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 DEFA1-201ENST00000382679 406 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 MIR577-201ENST00000385196 96 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 C2orf70-202ENST00000409392 764 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SKP293-201ENST00000411389 296 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AC234781.4-201ENST00000419384 244 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AKR1B10P1-201ENST00000425765 942 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 CYCSP12-201ENST00000437729 300 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 RPL23AP52-201ENST00000439311 478 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 GUSBP1-201ENST00000449061 758 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL795P-201ENST00000469617 282 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL285P-201ENST00000496478 264 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AC093663.1-201ENST00000497190 394 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 SNHG14-220ENST00000553149 513 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AC027237.2-201ENST00000558702 391 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC02169-201ENST00000561336 540 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms