RNA–Protein interactions for RNA: ENST00000327470.4

FANCF-201, Transcript of FA complementation group F, humanhuman

APPRIS P1 BASIC

Gene FANCF, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCF-201ENST00000327470 NISCHQ9Y2I1 1504 aa19.27■□□□□ 0.67
FANCF-201ENST00000327470 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
FANCF-201ENST00000327470 SUPT5HO00267 1087 aaKnown RBP18.16■□□□□ 0.5
FANCF-201ENST00000327470 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
FANCF-201ENST00000327470 PCGF6Q9BYE7 350 aa17.26■□□□□ 0.35
FANCF-201ENST00000327470 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
FANCF-201ENST00000327470 PELP1Q8IZL8 1130 aaKnown RBP17.18■□□□□ 0.34
FANCF-201ENST00000327470 FAM9AQ8IZU1 332 aaPredicted RBP17■□□□□ 0.31
FANCF-201ENST00000327470 MYT1Q01538 1121 aa16.84■□□□□ 0.29
FANCF-201ENST00000327470 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
FANCF-201ENST00000327470 HRCP23327 699 aa16.78■□□□□ 0.28
FANCF-201ENST00000327470 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
FANCF-201ENST00000327470 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
FANCF-201ENST00000327470 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
FANCF-201ENST00000327470 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
FANCF-201ENST00000327470 APLP2Q06481 763 aa16.62■□□□□ 0.25
FANCF-201ENST00000327470 TRIM26Q12899 539 aaPredicted RBP16.61■□□□□ 0.25
FANCF-201ENST00000327470 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
FANCF-201ENST00000327470 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
FANCF-201ENST00000327470 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
FANCF-201ENST00000327470 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
FANCF-201ENST00000327470 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
FANCF-201ENST00000327470 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
FANCF-201ENST00000327470 ERICH6Q7L0X2 663 aa16.26■□□□□ 0.19
FANCF-201ENST00000327470 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
FANCF-201ENST00000327470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
FANCF-201ENST00000327470 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
FANCF-201ENST00000327470 ATP1B4Q9UN42 357 aaPredicted RBP15.97■□□□□ 0.15
FANCF-201ENST00000327470 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
FANCF-201ENST00000327470 DIEXFQ68CQ4 756 aaKnown RBP15.94■□□□□ 0.14
FANCF-201ENST00000327470 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
FANCF-201ENST00000327470 NEFLP07196 543 aa15.92■□□□□ 0.14
FANCF-201ENST00000327470 ABCC9O60706 1549 aa15.91■□□□□ 0.14
FANCF-201ENST00000327470 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
FANCF-201ENST00000327470 ITGAEP38570 1179 aa15.8■□□□□ 0.12
FANCF-201ENST00000327470 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
FANCF-201ENST00000327470 ACIN1Q9UKV3 1341 aaKnown RBP15.72■□□□□ 0.11
FANCF-201ENST00000327470 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
FANCF-201ENST00000327470 ZNF316A6NFI3 1004 aaPredicted RBP15.62■□□□□ 0.09
FANCF-201ENST00000327470 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
FANCF-201ENST00000327470 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.09
FANCF-201ENST00000327470 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
FANCF-201ENST00000327470 BCANQ96GW7 911 aa15.5■□□□□ 0.07
FANCF-201ENST00000327470 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
FANCF-201ENST00000327470 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
FANCF-201ENST00000327470 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
FANCF-201ENST00000327470 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
FANCF-201ENST00000327470 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
FANCF-201ENST00000327470 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
FANCF-201ENST00000327470 DAXXQ9UER7 740 aaPredicted RBP15.28■□□□□ 0.04
FANCF-201ENST00000327470 ANP32CO43423 234 aa15.25■□□□□ 0.03
FANCF-201ENST00000327470 NACADO15069 1562 aa15.24■□□□□ 0.03
FANCF-201ENST00000327470 TRIM52Q96A61 297 aa15.2■□□□□ 0.02
FANCF-201ENST00000327470 MIER1Q8N108 512 aa15.2■□□□□ 0.02
FANCF-201ENST00000327470 P3H3Q8IVL6 736 aa15.17■□□□□ 0.02
FANCF-201ENST00000327470 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
FANCF-201ENST00000327470 RB1CC1Q8TDY2 1594 aa15.16■□□□□ 0.02
FANCF-201ENST00000327470 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
FANCF-201ENST00000327470 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
FANCF-201ENST00000327470 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
FANCF-201ENST00000327470 CLIP1P30622 1438 aa15.11■□□□□ 0.01
FANCF-201ENST00000327470 EEA1Q15075 1411 aa15.09■□□□□ 0.01
FANCF-201ENST00000327470 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
FANCF-201ENST00000327470 TNIKQ9UKE5 1360 aa15.06■□□□□ 0
FANCF-201ENST00000327470 FKBP8Q14318 412 aa15.06■□□□□ 0
FANCF-201ENST00000327470 EIF5BO60841 1220 aaKnown RBP15.05■□□□□ 0
FANCF-201ENST00000327470 GOLGA3Q08378 1498 aa15.04■□□□□ -0
FANCF-201ENST00000327470 ANP32EQ9BTT0 268 aa15.02□□□□□ -0.01
FANCF-201ENST00000327470 ZNF326Q5BKZ1 582 aaKnown RBP14.99□□□□□ -0.01
FANCF-201ENST00000327470 BCL11AQ9H165 835 aa14.98□□□□□ -0.01
FANCF-201ENST00000327470 WRNQ14191 1432 aaPredicted RBP eCLIP14.98□□□□□ -0.01
FANCF-201ENST00000327470 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
FANCF-201ENST00000327470 TONSLQ96HA7 1378 aa14.97□□□□□ -0.01
FANCF-201ENST00000327470 MYT1LQ9UL68 1186 aa14.95□□□□□ -0.02
FANCF-201ENST00000327470 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
FANCF-201ENST00000327470 HNRNPUQ00839 825 aaKnown RBP eCLIP14.92□□□□□ -0.02
FANCF-201ENST00000327470 ARID3CA6NKF2 412 aa14.91□□□□□ -0.02
FANCF-201ENST00000327470 SOGA1O94964 1423 aa14.91□□□□□ -0.02
FANCF-201ENST00000327470 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
FANCF-201ENST00000327470 NBR1Q14596 966 aa14.89□□□□□ -0.03
FANCF-201ENST00000327470 HIRIP3Q9BW71 556 aaPredicted RBP14.88□□□□□ -0.03
FANCF-201ENST00000327470 ANP32AP39687 249 aaKnown RBP14.87□□□□□ -0.03
FANCF-201ENST00000327470 NPM2Q86SE8 214 aaKnown RBP14.82□□□□□ -0.04
FANCF-201ENST00000327470 FAM9BQ8IZU0 186 aa14.81□□□□□ -0.04
FANCF-201ENST00000327470 CHIC2Q9UKJ5 165 aa14.8□□□□□ -0.04
FANCF-201ENST00000327470 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
FANCF-201ENST00000327470 FBLN2P98095 1184 aa14.78□□□□□ -0.04
FANCF-201ENST00000327470 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
FANCF-201ENST00000327470 WIZO95785 1651 aa14.77□□□□□ -0.04
FANCF-201ENST00000327470 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
FANCF-201ENST00000327470 ZNF777Q9ULD5 760 aaPredicted RBP14.76□□□□□ -0.05
FANCF-201ENST00000327470 MTUS2Q5JR59 1369 aa14.76□□□□□ -0.05
FANCF-201ENST00000327470 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
FANCF-201ENST00000327470 KIF27Q86VH2 1401 aa14.73□□□□□ -0.05
FANCF-201ENST00000327470 IRX6P78412 446 aaPredicted RBP14.72□□□□□ -0.05
FANCF-201ENST00000327470 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
FANCF-201ENST00000327470 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
FANCF-201ENST00000327470 MRS2Q9HD23 443 aa14.71□□□□□ -0.05
FANCF-201ENST00000327470 SIN3AQ96ST3 1273 aa14.71□□□□□ -0.06
FANCF-201ENST00000327470 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms