Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNA5SP103-201ENST00000459503 118 ntBASIC5.09□□□□□ -1.59
GPC4O75487 RN7SL30P-201ENST00000488416 306 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC072052.1-201ENST00000496556 306 ntBASIC5.09□□□□□ -1.59
GPC4O75487 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC4O75487 AC133963.2-201ENST00000513686 578 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC112198.4-201ENST00000515450 351 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC013701.1-201ENST00000522657 465 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.09□□□□□ -1.59
GPC4O75487 AP000859.1-201ENST00000525536 307 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AP003102.1-201ENST00000525638 661 ntBASIC5.09□□□□□ -1.59
GPC4O75487 C1DP5-201ENST00000525775 383 ntBASIC5.09□□□□□ -1.59
GPC4O75487 NPM1P35-201ENST00000533043 868 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AP002373.2-201ENST00000541631 1060 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC090022.1-201ENST00000546569 311 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GPC4O75487 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.09□□□□□ -1.59
GPC4O75487 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.09□□□□□ -1.59
GPC4O75487 MIR1269B-201ENST00000580405 75 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.09□□□□□ -1.59
GPC4O75487 DNAJC19P3-201ENST00000594491 331 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC144521.1-201ENST00000607148 956 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC126915.2-201ENST00000610957 190 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AL512624.1-201ENST00000613638 469 ntBASIC5.09□□□□□ -1.59
GPC4O75487 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC4O75487 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC4O75487 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GPC4O75487 AC119674.1-212ENST00000641155 993 ntBASIC5.09□□□□□ -1.59
GPC4O75487 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GPC4O75487 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
GPC4O75487 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC4O75487 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
GPC4O75487 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
GPC4O75487 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
GPC4O75487 AC000374.1-201ENST00000434698 1745 ntBASIC5.09□□□□□ -1.6
GPC4O75487 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.08□□□□□ -1.6
GPC4O75487 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
GPC4O75487 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GPC4O75487 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 HSPA8P17-201ENST00000427029 1382 ntBASIC5.08□□□□□ -1.6
GPC4O75487 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 CIR1P2-201ENST00000514821 1342 ntBASIC5.08□□□□□ -1.6
GPC4O75487 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GPC4O75487 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GPC4O75487 BMS1P3-201ENST00000372011 932 ntBASIC5.08□□□□□ -1.6
GPC4O75487 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GPC4O75487 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 MIR600-201ENST00000385007 98 ntBASIC5.08□□□□□ -1.6
GPC4O75487 RNU2-17P-201ENST00000410290 190 ntBASIC5.08□□□□□ -1.6
GPC4O75487 RN7SKP247-201ENST00000411094 308 ntBASIC5.08□□□□□ -1.6
GPC4O75487 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 AP000534.2-201ENST00000412729 568 ntBASIC5.08□□□□□ -1.6
GPC4O75487 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 DPY19L1P2-201ENST00000426647 915 ntBASIC5.08□□□□□ -1.6
GPC4O75487 MRPL50P1-201ENST00000431951 384 ntBASIC5.08□□□□□ -1.6
GPC4O75487 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.08□□□□□ -1.6
GPC4O75487 HMGN1P5-201ENST00000448591 263 ntBASIC5.08□□□□□ -1.6
GPC4O75487 AL389915.2-201ENST00000454576 441 ntBASIC5.08□□□□□ -1.6
GPC4O75487 AC079841.1-201ENST00000481228 950 ntBASIC5.08□□□□□ -1.6
GPC4O75487 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
GPC4O75487 AC097173.1-201ENST00000505862 819 ntBASIC5.08□□□□□ -1.6
GPC4O75487 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.08□□□□□ -1.6
GPC4O75487 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.08□□□□□ -1.6
GPC4O75487 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 AL358913.1-201ENST00000554342 121 ntBASIC5.08□□□□□ -1.6
GPC4O75487 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.08□□□□□ -1.6
GPC4O75487 AC018552.1-201ENST00000562099 811 ntBASIC5.08□□□□□ -1.6
GPC4O75487 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.08□□□□□ -1.6
GPC4O75487 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 AC011840.5-201ENST00000582125 771 ntBASIC5.08□□□□□ -1.6
GPC4O75487 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.08□□□□□ -1.6
GPC4O75487 AP005432.2-201ENST00000608162 586 ntBASIC5.08□□□□□ -1.6
GPC4O75487 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC4O75487 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC4O75487 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GPC4O75487 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
GPC4O75487 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms