RNA–Protein interactions for RNA: ENST00000621626.1

CCL4-203, Transcript of C-C motif chemokine ligand 4, humanhuman

TSL 1 (best) BASIC

Gene CCL4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-203ENST00000621626 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
CCL4-203ENST00000621626 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
CCL4-203ENST00000621626 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
CCL4-203ENST00000621626 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
CCL4-203ENST00000621626 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
CCL4-203ENST00000621626 FOXD1Q16676 465 aa19.39■□□□□ 0.69
CCL4-203ENST00000621626 ADRA2BP18089 450 aa18.85■□□□□ 0.61
CCL4-203ENST00000621626 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
CCL4-203ENST00000621626 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
CCL4-203ENST00000621626 MSH5O43196 834 aa17.86■□□□□ 0.45
CCL4-203ENST00000621626 PPP4R3CPQ6ZMV5 832 aa17.59■□□□□ 0.41
CCL4-203ENST00000621626 KCNA4P22459 653 aa17.42■□□□□ 0.38
CCL4-203ENST00000621626 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
CCL4-203ENST00000621626 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
CCL4-203ENST00000621626 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
CCL4-203ENST00000621626 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
CCL4-203ENST00000621626 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
CCL4-203ENST00000621626 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
CCL4-203ENST00000621626 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
CCL4-203ENST00000621626 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
CCL4-203ENST00000621626 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
CCL4-203ENST00000621626 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
CCL4-203ENST00000621626 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
CCL4-203ENST00000621626 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
CCL4-203ENST00000621626 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
CCL4-203ENST00000621626 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
CCL4-203ENST00000621626 ZBTB22O15209 634 aa16■□□□□ 0.15
CCL4-203ENST00000621626 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
CCL4-203ENST00000621626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.12
CCL4-203ENST00000621626 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
CCL4-203ENST00000621626 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
CCL4-203ENST00000621626 U3KPZ7 1027 aaPredicted RBP15.49■□□□□ 0.07
CCL4-203ENST00000621626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
CCL4-203ENST00000621626 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
CCL4-203ENST00000621626 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
CCL4-203ENST00000621626 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
CCL4-203ENST00000621626 APLP2Q06481 763 aa15.29■□□□□ 0.04
CCL4-203ENST00000621626 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
CCL4-203ENST00000621626 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
CCL4-203ENST00000621626 C1QBPQ07021 282 aaKnown RBP15.15■□□□□ 0.02
CCL4-203ENST00000621626 CAPN15O75808 1086 aa15□□□□□ -0.01
CCL4-203ENST00000621626 SPINK5Q9NQ38 1064 aaPredicted RBP14.99□□□□□ -0.01
CCL4-203ENST00000621626 ZNF219Q9P2Y4 722 aaPredicted RBP14.98□□□□□ -0.01
CCL4-203ENST00000621626 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
CCL4-203ENST00000621626 CACNB1Q02641 598 aaPredicted RBP14.77□□□□□ -0.05
CCL4-203ENST00000621626 POLA2Q14181 598 aa14.76□□□□□ -0.05
CCL4-203ENST00000621626 ABCB7O75027 752 aa14.7□□□□□ -0.06
CCL4-203ENST00000621626 FBLN2P98095 1184 aa14.64□□□□□ -0.07
CCL4-203ENST00000621626 FKBP8Q14318 412 aa14.63□□□□□ -0.07
CCL4-203ENST00000621626 DSG3P32926 999 aa14.62□□□□□ -0.07
CCL4-203ENST00000621626 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
CCL4-203ENST00000621626 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
CCL4-203ENST00000621626 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
CCL4-203ENST00000621626 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
CCL4-203ENST00000621626 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
CCL4-203ENST00000621626 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
CCL4-203ENST00000621626 SPDYE2Q495Y8 402 aa14.17□□□□□ -0.14
CCL4-203ENST00000621626 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
CCL4-203ENST00000621626 PROM2Q8N271 834 aa14.1□□□□□ -0.15
CCL4-203ENST00000621626 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
CCL4-203ENST00000621626 SSUH2Q9Y2M2 353 aa14.04□□□□□ -0.16
CCL4-203ENST00000621626 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
CCL4-203ENST00000621626 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCL4-203ENST00000621626 AKT1S1Q96B36 256 aa13.84□□□□□ -0.19
CCL4-203ENST00000621626 VASPP50552 380 aaPredicted RBP13.83□□□□□ -0.2
CCL4-203ENST00000621626 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
CCL4-203ENST00000621626 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
CCL4-203ENST00000621626 SPDYE1Q8NFV5 336 aaPredicted RBP13.72□□□□□ -0.21
CCL4-203ENST00000621626 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
CCL4-203ENST00000621626 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
CCL4-203ENST00000621626 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
CCL4-203ENST00000621626 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
CCL4-203ENST00000621626 MIER1Q8N108 512 aa13.65□□□□□ -0.22
CCL4-203ENST00000621626 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
CCL4-203ENST00000621626 PLEKHG5O94827 1062 aa13.63□□□□□ -0.23
CCL4-203ENST00000621626 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
CCL4-203ENST00000621626 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
CCL4-203ENST00000621626 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
CCL4-203ENST00000621626 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
CCL4-203ENST00000621626 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
CCL4-203ENST00000621626 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
CCL4-203ENST00000621626 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
CCL4-203ENST00000621626 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.29
CCL4-203ENST00000621626 PKD2Q13563 968 aa13.26□□□□□ -0.29
CCL4-203ENST00000621626 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCL4-203ENST00000621626 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
CCL4-203ENST00000621626 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
CCL4-203ENST00000621626 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
CCL4-203ENST00000621626 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.29
CCL4-203ENST00000621626 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCL4-203ENST00000621626 NUBP1P53384 320 aa13.2□□□□□ -0.3
CCL4-203ENST00000621626 GSE1Q14687 1217 aa13.2□□□□□ -0.3
CCL4-203ENST00000621626 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
CCL4-203ENST00000621626 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
CCL4-203ENST00000621626 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
CCL4-203ENST00000621626 FARP1Q9Y4F1 1045 aaPredicted RBP13.16□□□□□ -0.3
CCL4-203ENST00000621626 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
CCL4-203ENST00000621626 TRIM41Q8WV44 630 aa13.14□□□□□ -0.31
CCL4-203ENST00000621626 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
CCL4-203ENST00000621626 RGL2O15211 777 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms