RNA–Protein interactions for RNA: ENST00000372011.4

BMS1P3-201, Transcript of BMS1, ribosome biogenesis factor pseudogene 3, humanhuman

BASIC

Gene BMS1P3, Length 932 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMS1P3-201ENST00000372011 AEBP2Q6ZN18 517 aaPredicted RBP27.39■■□□□ 1.98
BMS1P3-201ENST00000372011 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
BMS1P3-201ENST00000372011 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
BMS1P3-201ENST00000372011 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.29
BMS1P3-201ENST00000372011 FOXD1Q16676 465 aa21.63■■□□□ 1.05
BMS1P3-201ENST00000372011 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
BMS1P3-201ENST00000372011 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
BMS1P3-201ENST00000372011 ADRA2BP18089 450 aa20.53■□□□□ 0.88
BMS1P3-201ENST00000372011 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
BMS1P3-201ENST00000372011 MSH5O43196 834 aa19.96■□□□□ 0.79
BMS1P3-201ENST00000372011 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
BMS1P3-201ENST00000372011 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
BMS1P3-201ENST00000372011 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
BMS1P3-201ENST00000372011 SCAF1Q9H7N4 1312 aaKnown RBP18.6■□□□□ 0.57
BMS1P3-201ENST00000372011 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
BMS1P3-201ENST00000372011 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
BMS1P3-201ENST00000372011 HOXD11P31277 338 aaPredicted RBP17.93■□□□□ 0.46
BMS1P3-201ENST00000372011 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
BMS1P3-201ENST00000372011 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
BMS1P3-201ENST00000372011 KCNA4P22459 653 aa17.85■□□□□ 0.45
BMS1P3-201ENST00000372011 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
BMS1P3-201ENST00000372011 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
BMS1P3-201ENST00000372011 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
BMS1P3-201ENST00000372011 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
BMS1P3-201ENST00000372011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.32
BMS1P3-201ENST00000372011 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
BMS1P3-201ENST00000372011 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
BMS1P3-201ENST00000372011 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
BMS1P3-201ENST00000372011 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
BMS1P3-201ENST00000372011 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
BMS1P3-201ENST00000372011 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
BMS1P3-201ENST00000372011 ZBTB22O15209 634 aa16.47■□□□□ 0.23
BMS1P3-201ENST00000372011 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
BMS1P3-201ENST00000372011 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
BMS1P3-201ENST00000372011 CAPN15O75808 1086 aa16.36■□□□□ 0.21
BMS1P3-201ENST00000372011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
BMS1P3-201ENST00000372011 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
BMS1P3-201ENST00000372011 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
BMS1P3-201ENST00000372011 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
BMS1P3-201ENST00000372011 DSG3P32926 999 aa16.21■□□□□ 0.19
BMS1P3-201ENST00000372011 APLP2Q06481 763 aa16.18■□□□□ 0.18
BMS1P3-201ENST00000372011 ATF5Q9Y2D1 282 aaPredicted RBP16.13■□□□□ 0.17
BMS1P3-201ENST00000372011 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
BMS1P3-201ENST00000372011 ABCB7O75027 752 aa16.08■□□□□ 0.16
BMS1P3-201ENST00000372011 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
BMS1P3-201ENST00000372011 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
BMS1P3-201ENST00000372011 POLA2Q14181 598 aa15.89■□□□□ 0.13
BMS1P3-201ENST00000372011 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
BMS1P3-201ENST00000372011 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
BMS1P3-201ENST00000372011 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
BMS1P3-201ENST00000372011 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
BMS1P3-201ENST00000372011 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
BMS1P3-201ENST00000372011 FBLN2P98095 1184 aa15.28■□□□□ 0.04
BMS1P3-201ENST00000372011 AKT1S1Q96B36 256 aa15.11■□□□□ 0.01
BMS1P3-201ENST00000372011 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
BMS1P3-201ENST00000372011 SPDYE6P0CI01 402 aa15.07■□□□□ 0
BMS1P3-201ENST00000372011 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
BMS1P3-201ENST00000372011 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
BMS1P3-201ENST00000372011 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
BMS1P3-201ENST00000372011 SSUH2Q9Y2M2 353 aa14.96□□□□□ -0.01
BMS1P3-201ENST00000372011 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
BMS1P3-201ENST00000372011 POTEHQ6S545 545 aa14.88□□□□□ -0.03
BMS1P3-201ENST00000372011 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
BMS1P3-201ENST00000372011 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
BMS1P3-201ENST00000372011 SPDYE4A6NLX3 237 aa14.77□□□□□ -0.05
BMS1P3-201ENST00000372011 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
BMS1P3-201ENST00000372011 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
BMS1P3-201ENST00000372011 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
BMS1P3-201ENST00000372011 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
BMS1P3-201ENST00000372011 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
BMS1P3-201ENST00000372011 PROM2Q8N271 834 aa14.49□□□□□ -0.09
BMS1P3-201ENST00000372011 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
BMS1P3-201ENST00000372011 FKBP8Q14318 412 aa14.47□□□□□ -0.09
BMS1P3-201ENST00000372011 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
BMS1P3-201ENST00000372011 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
BMS1P3-201ENST00000372011 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
BMS1P3-201ENST00000372011 HAX1O00165 279 aa14.29□□□□□ -0.12
BMS1P3-201ENST00000372011 EVX2Q03828 476 aa14.27□□□□□ -0.13
BMS1P3-201ENST00000372011 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
BMS1P3-201ENST00000372011 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
BMS1P3-201ENST00000372011 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
BMS1P3-201ENST00000372011 SP7Q8TDD2 431 aaPredicted RBP14.11□□□□□ -0.15
BMS1P3-201ENST00000372011 MIER1Q8N108 512 aa14.05□□□□□ -0.16
BMS1P3-201ENST00000372011 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
BMS1P3-201ENST00000372011 PLCD3Q8N3E9 789 aa13.96□□□□□ -0.17
BMS1P3-201ENST00000372011 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
BMS1P3-201ENST00000372011 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
BMS1P3-201ENST00000372011 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
BMS1P3-201ENST00000372011 GABBR2O75899 941 aa13.87□□□□□ -0.19
BMS1P3-201ENST00000372011 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
BMS1P3-201ENST00000372011 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
BMS1P3-201ENST00000372011 ZNF579Q8NAF0 562 aaKnown RBP13.81□□□□□ -0.2
BMS1P3-201ENST00000372011 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
BMS1P3-201ENST00000372011 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
BMS1P3-201ENST00000372011 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
BMS1P3-201ENST00000372011 NUBP1P53384 320 aa13.77□□□□□ -0.21
BMS1P3-201ENST00000372011 PAK3O75914 559 aaPredicted RBP13.76□□□□□ -0.21
BMS1P3-201ENST00000372011 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
BMS1P3-201ENST00000372011 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
BMS1P3-201ENST00000372011 IFNLR1Q8IU57 520 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms