Protein–RNA interactions for Protein: Q9BYR5

KRTAP4-2, Keratin-associated protein 4-2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-2Q9BYR5 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 SERAC1-202ENST00000367104 3948 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 PROX2-201ENST00000556084 3359 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AC134682.1-201ENST00000569285 3377 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AC110053.1-201ENST00000523156 1744 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RBM23-205ENST00000542016 1743 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 NTPCR-201ENST00000366627 1762 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 DKK2-201ENST00000285311 3638 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AC112176.1-201ENST00000565428 3024 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 NCALD-202ENST00000311028 3655 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 LINC02080-201ENST00000585863 3085 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AC087741.1-201ENST00000570309 4399 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 LINC01016-201ENST00000506222 3151 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AL450998.1-201ENST00000321418 438 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 OR2Z1-201ENST00000324060 1056 ntAPPRIS P1 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RN7SKP184-201ENST00000362348 333 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S12-201ENST00000362400 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S11-201ENST00000362464 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S3-201ENST00000362467 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S1-201ENST00000362482 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S5-201ENST00000362526 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S10-201ENST00000363040 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S8-201ENST00000363473 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S17-201ENST00000363500 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S4-201ENST00000363511 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S6-201ENST00000363754 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5SP202-201ENST00000364315 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNU6-654P-201ENST00000364373 107 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S14-201ENST00000364485 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S2-201ENST00000364718 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S15-201ENST00000365055 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S16-201ENST00000365387 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RN7SKP69-201ENST00000365390 305 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S7-201ENST00000365651 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5S13-201ENST00000365656 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 Y_RNA.448-201ENST00000384185 108 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 Y_RNA.547-201ENST00000384654 119 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNU6-59P-201ENST00000384787 107 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 MANBAL-203ENST00000397150 620 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RNA5SP41-201ENST00000411020 101 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 DDX11L5-201ENST00000421620 654 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AL445426.1-201ENST00000427290 547 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 FAM83C-AS1-201ENST00000429167 352 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 RPL10P3-201ENST00000431607 468 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AL050331.1-201ENST00000435100 623 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 HMGN2P20-201ENST00000437531 273 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 CST9LP2-201ENST00000437612 320 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 ASS1P11-201ENST00000441309 1216 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 PTMAP3-201ENST00000447474 330 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 HMGN2P18-201ENST00000450680 270 ntBASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-2Q9BYR5 AC119749.1-201ENST00000454884 691 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms