Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 MROH7-203ENST00000395690 3413 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 ZBTB14-208ENST00000615385 3350 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 DDX19A-201ENST00000302243 2997 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 ZMYND11-207ENST00000397959 4138 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 DHX37-206ENST00000544745 4112 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 GFM1-210ENST00000486715 3721 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 ATP8B5P-204ENST00000439972 2522 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 BARD1-210ENST00000613374 4096 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 BROX-207ENST00000537020 3670 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 SLC22A6-201ENST00000360421 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 CCDC149-202ENST00000389609 2127 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 CSPG4P10-201ENST00000456932 4817 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 BBS9-201ENST00000242067 4027 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AMIGO2-203ENST00000550413 2856 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 APLNR-202ENST00000606794 3609 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 CXCR1-201ENST00000295683 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 ACTG2-202ENST00000409624 2064 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AP1B1-205ENST00000415447 2838 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC068769.1-201ENST00000474767 2426 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 C8orf17-202ENST00000625034 2775 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 TAS2R4-201ENST00000247881 2378 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RNA5SP71-201ENST00000362967 126 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RNU6-137P-201ENST00000363680 108 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RNA5SP427-201ENST00000365323 119 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 Y_RNA.341-201ENST00000365341 102 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 Y_RNA.360-201ENST00000365512 102 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RNU6-444P-201ENST00000383988 108 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 Y_RNA.507-201ENST00000384500 99 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RNU6-855P-201ENST00000410395 104 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 LYPLA2P3-201ENST00000417429 576 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 HMGA1P6-201ENST00000418454 391 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 FAM213AP1-201ENST00000418757 668 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RPL34P27-201ENST00000428810 349 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RPSAP8-201ENST00000429844 889 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC018638.4-201ENST00000465971 1150 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC026336.1-201ENST00000466577 351 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RN7SL762P-201ENST00000469864 289 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RN7SL568P-201ENST00000493069 298 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 PGAM1P1-201ENST00000504014 556 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 YWHAQP6-201ENST00000508556 304 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RPPH1-3P-201ENST00000516541 322 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RN7SKP60-201ENST00000516985 239 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RNU7-156P-201ENST00000517214 74 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 CYCSP23-201ENST00000519781 313 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 IGLV3-7-201ENST00000522952 271 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 LINC02124-201ENST00000570087 484 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RN7SL457P-201ENST00000578760 287 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RN7SL49P-201ENST00000581392 298 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 MIR3163-201ENST00000581592 73 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 RN7SL731P-201ENST00000584329 293 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 MIR15A-201ENST00000607334 83 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AL591926.2-201ENST00000611780 500 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AL352984.2-202ENST00000613699 155 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC244100.4-201ENST00000617747 388 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC073592.9-201ENST00000624885 371 ntBASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 XRCC2-201ENST00000359321 3067 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 FAM162A-203ENST00000477892 3052 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 AC002101.1-201ENST00000564021 1990 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP4-9Q9BYQ8 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms