RNA–Protein interactions for RNA: ENST00000410395.1

RNU6-855P-201, Transcript of RNA, U6 small nuclear 855, pseudogene, humanhuman

BASIC

Gene RNU6-855P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-855P-201ENST00000410395 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
RNU6-855P-201ENST00000410395 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
RNU6-855P-201ENST00000410395 SENP3Q9H4L4 574 aaPredicted RBP10.98□□□□□ -0.65
RNU6-855P-201ENST00000410395 PHF23Q9BUL5 403 aaPredicted RBP10.83□□□□□ -0.68
RNU6-855P-201ENST00000410395 FOXD1Q16676 465 aa10.17□□□□□ -0.78
RNU6-855P-201ENST00000410395 PLPPR3Q6T4P5 718 aa9.96□□□□□ -0.82
RNU6-855P-201ENST00000410395 PPP6R1Q9UPN7 881 aa9.59□□□□□ -0.87
RNU6-855P-201ENST00000410395 ADRA2BP18089 450 aa9.57□□□□□ -0.88
RNU6-855P-201ENST00000410395 PIAS4Q8N2W9 510 aaPredicted RBP9.54□□□□□ -0.88
RNU6-855P-201ENST00000410395 MSH5O43196 834 aa9.51□□□□□ -0.89
RNU6-855P-201ENST00000410395 POTEDQ86YR6 584 aa8.98□□□□□ -0.97
RNU6-855P-201ENST00000410395 SCAF1Q9H7N4 1312 aaKnown RBP8.81□□□□□ -1
RNU6-855P-201ENST00000410395 DMRT2Q9Y5R5 561 aa8.73□□□□□ -1.01
RNU6-855P-201ENST00000410395 MAPK8IP2Q13387 824 aaPredicted RBP8.72□□□□□ -1.01
RNU6-855P-201ENST00000410395 PPP4R3CPQ6ZMV5 832 aa8.72□□□□□ -1.01
RNU6-855P-201ENST00000410395 CNKSR2Q8WXI2 1034 aa8.55□□□□□ -1.04
RNU6-855P-201ENST00000410395 HOXD11P31277 338 aaPredicted RBP8.47□□□□□ -1.05
RNU6-855P-201ENST00000410395 NCBP3Q53F19 620 aaKnown RBP8.46□□□□□ -1.06
RNU6-855P-201ENST00000410395 RNF216Q9NWF9 866 aaPredicted RBP8.45□□□□□ -1.06
RNU6-855P-201ENST00000410395 NPM3O75607 178 aaKnown RBP8.32□□□□□ -1.08
RNU6-855P-201ENST00000410395 DCAF8L1A6NGE4 600 aa8.27□□□□□ -1.09
RNU6-855P-201ENST00000410395 KCNA4P22459 653 aa8.27□□□□□ -1.09
RNU6-855P-201ENST00000410395 DNAJC5BQ9UF47 199 aa8.22□□□□□ -1.09
RNU6-855P-201ENST00000410395 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
RNU6-855P-201ENST00000410395 C1QBPQ07021 282 aaKnown RBP8.02□□□□□ -1.13
RNU6-855P-201ENST00000410395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.02□□□□□ -1.13
RNU6-855P-201ENST00000410395 CACNB1Q02641 598 aaPredicted RBP8.01□□□□□ -1.13
RNU6-855P-201ENST00000410395 SLC4A2P04920 1241 aa7.9□□□□□ -1.14
RNU6-855P-201ENST00000410395 U3KPZ7 1027 aaPredicted RBP7.9□□□□□ -1.14
RNU6-855P-201ENST00000410395 SLC4A1APQ9BWU0 796 aaKnown RBP7.85□□□□□ -1.15
RNU6-855P-201ENST00000410395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.76□□□□□ -1.17
RNU6-855P-201ENST00000410395 HNRNPUL2Q1KMD3 747 aaKnown RBP7.76□□□□□ -1.17
RNU6-855P-201ENST00000410395 APLP2Q06481 763 aa7.75□□□□□ -1.17
RNU6-855P-201ENST00000410395 MYCNP04198 464 aaPredicted RBP7.72□□□□□ -1.17
RNU6-855P-201ENST00000410395 SAMD1Q6SPF0 538 aaPredicted RBP7.72□□□□□ -1.17
RNU6-855P-201ENST00000410395 FOXD4L1Q9NU39 408 aa7.71□□□□□ -1.18
RNU6-855P-201ENST00000410395 SPINK5Q9NQ38 1064 aaPredicted RBP7.7□□□□□ -1.18
RNU6-855P-201ENST00000410395 CAPN15O75808 1086 aa7.68□□□□□ -1.18
RNU6-855P-201ENST00000410395 ZNF219Q9P2Y4 722 aaPredicted RBP7.65□□□□□ -1.18
RNU6-855P-201ENST00000410395 DSG3P32926 999 aa7.63□□□□□ -1.19
RNU6-855P-201ENST00000410395 ZBTB22O15209 634 aa7.6□□□□□ -1.19
RNU6-855P-201ENST00000410395 TRHP20396 242 aaPredicted RBP7.58□□□□□ -1.2
RNU6-855P-201ENST00000410395 ABCB7O75027 752 aa7.5□□□□□ -1.21
RNU6-855P-201ENST00000410395 ATXN8OSP0DMR3 200 aa7.49□□□□□ -1.21
RNU6-855P-201ENST00000410395 ATF5Q9Y2D1 282 aaPredicted RBP7.46□□□□□ -1.22
RNU6-855P-201ENST00000410395 POLA2Q14181 598 aa7.42□□□□□ -1.22
RNU6-855P-201ENST00000410395 CSRNP3Q8WYN3 585 aa7.39□□□□□ -1.23
RNU6-855P-201ENST00000410395 ZBTB12Q9Y330 459 aaPredicted RBP7.37□□□□□ -1.23
RNU6-855P-201ENST00000410395 EHMT2Q96KQ7 1210 aa7.33□□□□□ -1.24
RNU6-855P-201ENST00000410395 RBM42Q9BTD8 480 aaKnown RBP7.32□□□□□ -1.24
RNU6-855P-201ENST00000410395 FBLN2P98095 1184 aa7.21□□□□□ -1.26
RNU6-855P-201ENST00000410395 OSCARQ8IYS5 282 aa7.2□□□□□ -1.26
RNU6-855P-201ENST00000410395 AKT1S1Q96B36 256 aa7.17□□□□□ -1.26
RNU6-855P-201ENST00000410395 MKRN4PQ13434 485 aaPredicted RBP7.16□□□□□ -1.26
RNU6-855P-201ENST00000410395 SPDYE2BA6NHP3 402 aa7.14□□□□□ -1.27
RNU6-855P-201ENST00000410395 SPDYE6P0CI01 402 aa7.14□□□□□ -1.27
RNU6-855P-201ENST00000410395 SPDYE2Q495Y8 402 aa7.14□□□□□ -1.27
RNU6-855P-201ENST00000410395 POTEHQ6S545 545 aa7.07□□□□□ -1.28
RNU6-855P-201ENST00000410395 REM2Q8IYK8 340 aaPredicted RBP7.07□□□□□ -1.28
RNU6-855P-201ENST00000410395 CHRDL2Q6WN34 429 aa7.06□□□□□ -1.28
RNU6-855P-201ENST00000410395 SSUH2Q9Y2M2 353 aa7.06□□□□□ -1.28
RNU6-855P-201ENST00000410395 ZNF692Q9BU19 519 aaPredicted RBP7.02□□□□□ -1.29
RNU6-855P-201ENST00000410395 PITPNM1O00562 1244 aa7□□□□□ -1.29
RNU6-855P-201ENST00000410395 SPDYE1Q8NFV5 336 aaPredicted RBP6.96□□□□□ -1.3
RNU6-855P-201ENST00000410395 FXR2P51116 673 aaKnown RBP eCLIP6.93□□□□□ -1.3
RNU6-855P-201ENST00000410395 PABPN1Q86U42 306 aaKnown RBP eCLIP6.92□□□□□ -1.3
RNU6-855P-201ENST00000410395 PIP4P2Q8N4L2 257 aa6.92□□□□□ -1.3
RNU6-855P-201ENST00000410395 SPDYE4A6NLX3 237 aa6.89□□□□□ -1.31
RNU6-855P-201ENST00000410395 CLEC11AQ9Y240 323 aa6.87□□□□□ -1.31
RNU6-855P-201ENST00000410395 PRR29P0C7W0 189 aa6.81□□□□□ -1.32
RNU6-855P-201ENST00000410395 PROM2Q8N271 834 aa6.81□□□□□ -1.32
RNU6-855P-201ENST00000410395 STAG3Q9UJ98 1225 aa6.81□□□□□ -1.32
RNU6-855P-201ENST00000410395 PRKAR2AP13861 404 aaKnown RBP6.8□□□□□ -1.32
RNU6-855P-201ENST00000410395 HAX1O00165 279 aa6.72□□□□□ -1.33
RNU6-855P-201ENST00000410395 CHADLQ6NUI6 762 aa6.72□□□□□ -1.33
RNU6-855P-201ENST00000410395 SP7Q8TDD2 431 aaPredicted RBP6.71□□□□□ -1.34
RNU6-855P-201ENST00000410395 C19orf67A6NJJ6 358 aa6.7□□□□□ -1.34
RNU6-855P-201ENST00000410395 CREBZFQ9NS37 354 aa6.69□□□□□ -1.34
RNU6-855P-201ENST00000410395 FARP1Q9Y4F1 1045 aaPredicted RBP6.69□□□□□ -1.34
RNU6-855P-201ENST00000410395 FKBP8Q14318 412 aa6.68□□□□□ -1.34
RNU6-855P-201ENST00000410395 EVX2Q03828 476 aa6.64□□□□□ -1.35
RNU6-855P-201ENST00000410395 MNX1P50219 401 aaPredicted RBP6.61□□□□□ -1.35
RNU6-855P-201ENST00000410395 CD44P16070 742 aaKnown RBP6.6□□□□□ -1.35
RNU6-855P-201ENST00000410395 NPM1P06748 294 aaKnown RBP eCLIP6.59□□□□□ -1.35
RNU6-855P-201ENST00000410395 CLCN6P51797 869 aa6.56□□□□□ -1.36
RNU6-855P-201ENST00000410395 PLEKHG5O94827 1062 aa6.55□□□□□ -1.36
RNU6-855P-201ENST00000410395 ZNF579Q8NAF0 562 aaKnown RBP6.55□□□□□ -1.36
RNU6-855P-201ENST00000410395 FBXO3Q9UK99 471 aa6.55□□□□□ -1.36
RNU6-855P-201ENST00000410395 GABBR2O75899 941 aa6.53□□□□□ -1.36
RNU6-855P-201ENST00000410395 PAK3O75914 559 aaPredicted RBP6.53□□□□□ -1.36
RNU6-855P-201ENST00000410395 MIER1Q8N108 512 aa6.52□□□□□ -1.37
RNU6-855P-201ENST00000410395 ZRANB1Q9UGI0 708 aa6.52□□□□□ -1.37
RNU6-855P-201ENST00000410395 PLCD3Q8N3E9 789 aa6.51□□□□□ -1.37
RNU6-855P-201ENST00000410395 ZBTB47Q9UFB7 747 aaPredicted RBP6.51□□□□□ -1.37
RNU6-855P-201ENST00000410395 VASPP50552 380 aaPredicted RBP6.45□□□□□ -1.38
RNU6-855P-201ENST00000410395 PHF12Q96QT6 1004 aa6.44□□□□□ -1.38
RNU6-855P-201ENST00000410395 CCDC61Q9Y6R9 512 aa6.44□□□□□ -1.38
RNU6-855P-201ENST00000410395 NUBP1P53384 320 aa6.43□□□□□ -1.38
RNU6-855P-201ENST00000410395 RASEFQ8IZ41 740 aa6.43□□□□□ -1.38
RNU6-855P-201ENST00000410395 GALR2O43603 387 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms