Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RPS26P4-201ENST00000431743 355 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN6P29350 AC073052.1-201ENST00000440417 714 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 KNOP1P3-201ENST00000446933 426 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AC092647.2-201ENST00000452998 253 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN6P29350 GYG1P1-201ENST00000460864 698 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AL591473.1-201ENST00000464297 313 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.72□□□□□ -1.65
PTPN6P29350 AC090114.3-201ENST00000479267 829 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AC109462.1-201ENST00000491087 368 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AC020890.1-201ENST00000491837 504 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.72□□□□□ -1.65
PTPN6P29350 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN6P29350 RNA5SP249-201ENST00000516127 99 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN6P29350 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PTPN6P29350 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN6P29350 AC074029.2-201ENST00000551045 634 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 CYCSP40-201ENST00000575927 294 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AL445222.1-201ENST00000607259 628 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN6P29350 AC116447.1-201ENST00000613153 453 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 AC020658.4-201ENST00000613987 684 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN6P29350 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PTPN6P29350 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN6P29350 DHX9P1-201ENST00000436565 3076 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN6P29350 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN6P29350 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN6P29350 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
PTPN6P29350 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN6P29350 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PTPN6P29350 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN6P29350 ASNSP1-201ENST00000518311 1939 ntBASIC4.72□□□□□ -1.65
PTPN6P29350 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PTPN6P29350 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTPN6P29350 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
PTPN6P29350 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PTPN6P29350 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 AL645927.1-201ENST00000396783 406 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AL512504.1-201ENST00000415494 778 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC092570.3-201ENST00000420113 693 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.71□□□□□ -1.66
PTPN6P29350 AC006065.1-201ENST00000422539 802 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AL158073.1-201ENST00000426848 1104 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 TMX2P1-201ENST00000436507 708 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC092013.1-201ENST00000438795 332 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN6P29350 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN6P29350 AC073850.1-201ENST00000449243 255 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC093166.2-201ENST00000455969 1017 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 RN7SL517P-201ENST00000462240 305 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC097484.1-201ENST00000471148 389 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 RPL7AP6-201ENST00000477943 801 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC090686.1-201ENST00000481577 749 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 NPM1P29-201ENST00000483112 803 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 UBA52P3-201ENST00000491303 382 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 RN7SL808P-201ENST00000496066 299 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN6P29350 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN6P29350 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN6P29350 BTG4P1-201ENST00000510421 183 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN6P29350 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.71□□□□□ -1.66
PTPN6P29350 AC092490.3-201ENST00000545370 572 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.71□□□□□ -1.66
PTPN6P29350 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN6P29350 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.71□□□□□ -1.66
PTPN6P29350 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN6P29350 MIR8069-1-201ENST00000616627 86 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC068870.2-201ENST00000620635 389 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 MIR8069-2-201ENST00000621412 86 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC019080.5-201ENST00000624891 757 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.71□□□□□ -1.66
PTPN6P29350 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PTPN6P29350 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PTPN6P29350 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PTPN6P29350 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.71□□□□□ -1.66
PTPN6P29350 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 AC009643.2-201ENST00000603543 1448 ntBASIC4.71□□□□□ -1.66
PTPN6P29350 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.71□□□□□ -1.66
PTPN6P29350 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN6P29350 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms