Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.02□□□□□ -1.45
ABCA3Q99758 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 AL022323.4-201ENST00000623980 13120 ntBASIC6.02□□□□□ -1.45
ABCA3Q99758 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
ABCA3Q99758 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
ABCA3Q99758 CKS1BP6-201ENST00000424932 240 ntBASIC6.02□□□□□ -1.45
ABCA3Q99758 ISCUP1-201ENST00000454451 448 ntBASIC6.02□□□□□ -1.45
ABCA3Q99758 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.02□□□□□ -1.45
ABCA3Q99758 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.02□□□□□ -1.45
ABCA3Q99758 FTH1P21-201ENST00000512179 511 ntBASIC6.02□□□□□ -1.45
ABCA3Q99758 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
ABCA3Q99758 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.02□□□□□ -1.45
ABCA3Q99758 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.02□□□□□ -1.45
ABCA3Q99758 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ABCA3Q99758 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ABCA3Q99758 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.01□□□□□ -1.45
ABCA3Q99758 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
ABCA3Q99758 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 TCP11X1-202ENST00000622971 1372 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 RNU6-525P-201ENST00000363685 104 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 AC008280.1-201ENST00000418851 412 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 AL691449.1-201ENST00000426570 421 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 AL133372.1-201ENST00000493565 745 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 DSTNP2-201ENST00000504533 515 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.01□□□□□ -1.45
ABCA3Q99758 CYCSP40-201ENST00000575927 294 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 RNU4-89P-201ENST00000607443 133 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 AL352984.2-202ENST00000613699 155 ntBASIC6.01□□□□□ -1.45
ABCA3Q99758 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.01□□□□□ -1.45
ABCA3Q99758 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ABCA3Q99758 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 SNORA62.3-201ENST00000365110 153 ntBASIC6□□□□□ -1.45
ABCA3Q99758 MT-RNR1-201ENST00000389680 954 ntBASIC6□□□□□ -1.45
ABCA3Q99758 RNU6ATAC-201ENST00000408749 126 ntBASIC6□□□□□ -1.45
ABCA3Q99758 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6□□□□□ -1.45
ABCA3Q99758 AC093578.1-201ENST00000415219 368 ntBASIC6□□□□□ -1.45
ABCA3Q99758 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6□□□□□ -1.45
ABCA3Q99758 PRSS3P4-201ENST00000453323 162 ntBASIC6□□□□□ -1.45
ABCA3Q99758 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6□□□□□ -1.45
ABCA3Q99758 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
ABCA3Q99758 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6□□□□□ -1.45
ABCA3Q99758 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6□□□□□ -1.45
ABCA3Q99758 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6□□□□□ -1.45
ABCA3Q99758 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6□□□□□ -1.45
ABCA3Q99758 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6□□□□□ -1.45
ABCA3Q99758 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6□□□□□ -1.45
ABCA3Q99758 MIR8059-201ENST00000620427 81 ntBASIC6□□□□□ -1.45
ABCA3Q99758 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ABCA3Q99758 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
ABCA3Q99758 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
ABCA3Q99758 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6□□□□□ -1.45
ABCA3Q99758 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ABCA3Q99758 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6□□□□□ -1.45
ABCA3Q99758 AL731532.1-201ENST00000623972 4236 ntBASIC6□□□□□ -1.45
ABCA3Q99758 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ABCA3Q99758 AL672167.2-201ENST00000377164 879 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ABCA3Q99758 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.99□□□□□ -1.45
ABCA3Q99758 RN7SKP202-201ENST00000410439 330 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 SNRPFP1-201ENST00000414761 252 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 COX5BP7-201ENST00000414780 274 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 MFSD13B-201ENST00000420133 1290 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 Z74021.1-201ENST00000423610 407 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 AC021876.1-201ENST00000425959 359 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 AL117339.2-201ENST00000430475 180 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.99□□□□□ -1.45
ABCA3Q99758 AC093166.2-201ENST00000455969 1017 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 ABCC13-202ENST00000463099 3842 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.99□□□□□ -1.45
ABCA3Q99758 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.99□□□□□ -1.45
ABCA3Q99758 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.99□□□□□ -1.45
ABCA3Q99758 GTF2IP22-201ENST00000554443 182 ntBASIC5.99□□□□□ -1.45
ABCA3Q99758 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ABCA3Q99758 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms