Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ADAM30-201ENST00000369400 2963 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 TTI2-206ENST00000613904 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 TNFAIP3-201ENST00000237289 4432 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 RHOBTB2-205ENST00000519685 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 DCTN1-201ENST00000361874 4500 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 RNF40-204ENST00000563683 4063 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF587-202ENST00000419854 5731 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 OR2S2-201ENST00000341959 1047 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 RNU4-82P-201ENST00000362443 140 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 SNORD114-7-201ENST00000362520 77 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 Y_RNA.191-201ENST00000363972 113 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 U3.46-201ENST00000365612 216 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 RPSAP72-201ENST00000407020 358 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC245128.2-201ENST00000412970 284 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AL355298.1-201ENST00000425391 180 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC099344.1-201ENST00000433548 492 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC244670.1-201ENST00000436879 112 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 CLUHP5-201ENST00000438421 774 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 DDX11L1-201ENST00000450305 632 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 HSPE1P6-201ENST00000479457 291 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL521P-201ENST00000488398 297 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 Y_RNA.710-201ENST00000516975 110 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ALG1L13P-201ENST00000518201 521 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 IGKV1-13-201ENST00000521705 347 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 SOX5-213ENST00000541847 758 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 KRTAP2-1-202ENST00000542137 375 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC010650.1-201ENST00000567559 494 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR3129-201ENST00000581095 76 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 PPY-202ENST00000587006 431 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 SMIM22-204ENST00000588606 394 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 FAM95B1-213ENST00000593047 767 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF544-203ENST00000594384 588 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF766-208ENST00000600821 568 ntTSL 4 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 SNORD11B-201ENST00000607707 90 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 IGKV1D-13-201ENST00000611391 376 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 MED15P6-202ENST00000621415 787 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ALG13-226ENST00000622986 582 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC079456.1-201ENST00000624010 480 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 PDCL-201ENST00000259467 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 NPC1L1-201ENST00000289547 5048 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF691-203ENST00000372504 1935 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 HPSE-202ENST00000405413 4652 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 GABRA2-201ENST00000356504 2770 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF285-201ENST00000544719 2793 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC008555.1-201ENST00000561778 2757 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 KLHL20-201ENST00000209884 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC008957.3-201ENST00000624112 2242 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 LACC1-203ENST00000441843 4262 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 CPSF1P1-201ENST00000397477 3730 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 PARM1-202ENST00000513238 4308 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 GDAP1-201ENST00000220822 3666 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 SP100-201ENST00000264052 3882 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ACAD10-201ENST00000313698 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 PAMR1-207ENST00000619888 3142 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 CTTNBP2-201ENST00000160373 5970 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 SAMD7-202ENST00000428432 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 TSHR-203ENST00000541158 4566 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms