Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 HMGN1P13-201ENST00000505795 138 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC018797.1-201ENST00000510791 255 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 OR5AN2P-201ENST00000534535 896 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 RPL21P5-201ENST00000554662 472 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC022884.3-201ENST00000579571 248 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 MIR3682-201ENST00000581338 84 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC018695.5-201ENST00000605872 315 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC005618.4-201ENST00000625053 554 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC026634.1-201ENST00000634369 198 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 IMMTP1-201ENST00000435590 2219 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 AC005614.1-201ENST00000598952 3653 ntBASIC7.37□□□□□ -1.23
RNF135Q8IUD6 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF135Q8IUD6 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL356361.1-201ENST00000400943 1459 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AP003486.1-201ENST00000525716 3994 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 GAPDHP24-201ENST00000328713 983 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 SNORD56.2-201ENST00000363242 71 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 RNA5SP433-201ENST00000364491 114 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 RNY4P34-201ENST00000364779 95 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 RNU6-1103P-201ENST00000384150 107 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 CNN3P1-201ENST00000401596 935 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL158073.1-201ENST00000426848 1104 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 SKP1P1-201ENST00000438081 489 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC002504.1-201ENST00000438281 691 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 RPS27AP15-201ENST00000447672 466 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC022364.2-201ENST00000457963 554 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 RN7SL88P-201ENST00000480166 299 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 EIF3LP3-201ENST00000495197 822 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 POU5F1P7-201ENST00000508759 541 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC022690.1-201ENST00000526681 550 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC008127.2-201ENST00000549925 1075 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 ARL2BPP2-201ENST00000550907 489 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 NMNAT1P1-201ENST00000554095 876 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 RPS3AP23-202ENST00000574601 686 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC015801.1-201ENST00000585651 153 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL136295.6-201ENST00000610486 658 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 MIR8089-201ENST00000620165 82 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 PISRT1-201ENST00000626175 531 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms