Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.05□□□□□ -1.6
RETP07949 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.05□□□□□ -1.6
RETP07949 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.05□□□□□ -1.6
RETP07949 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.05□□□□□ -1.6
RETP07949 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.05□□□□□ -1.6
RETP07949 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.05□□□□□ -1.6
RETP07949 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.05□□□□□ -1.6
RETP07949 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.05□□□□□ -1.6
RETP07949 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.05□□□□□ -1.6
RETP07949 AL109618.2-201ENST00000605527 211 ntBASIC5.05□□□□□ -1.6
RETP07949 AC244517.3-201ENST00000616254 1235 ntBASIC5.05□□□□□ -1.6
RETP07949 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.05□□□□□ -1.6
RETP07949 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.05□□□□□ -1.6
RETP07949 AC132825.8-201ENST00000640783 297 ntBASIC5.05□□□□□ -1.6
RETP07949 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RETP07949 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.05□□□□□ -1.6
RETP07949 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RETP07949 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RETP07949 AC008079.2-201ENST00000623543 20396 ntBASIC5.05□□□□□ -1.6
RETP07949 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.05□□□□□ -1.6
RETP07949 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.04□□□□□ -1.6
RETP07949 SAMMSON-226ENST00000642089 1582 ntBASIC5.04□□□□□ -1.6
RETP07949 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RETP07949 AC000123.3-201ENST00000624029 4975 ntBASIC5.04□□□□□ -1.6
RETP07949 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
RETP07949 RN7SKP224-201ENST00000364140 325 ntBASIC5.04□□□□□ -1.6
RETP07949 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.04□□□□□ -1.6
RETP07949 PTP4A1P1-201ENST00000420539 515 ntBASIC5.04□□□□□ -1.6
RETP07949 AC004074.1-201ENST00000421810 1063 ntBASIC5.04□□□□□ -1.6
RETP07949 CHIAP3-201ENST00000423668 1133 ntBASIC5.04□□□□□ -1.6
RETP07949 AC234779.1-201ENST00000425910 285 ntBASIC5.04□□□□□ -1.6
RETP07949 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.04□□□□□ -1.6
RETP07949 TPT1P1-201ENST00000458495 518 ntBASIC5.04□□□□□ -1.6
RETP07949 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.04□□□□□ -1.6
RETP07949 RPL7AP28-201ENST00000464513 571 ntBASIC5.04□□□□□ -1.6
RETP07949 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RETP07949 RN7SL814P-201ENST00000487715 300 ntBASIC5.04□□□□□ -1.6
RETP07949 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.04□□□□□ -1.6
RETP07949 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.04□□□□□ -1.6
RETP07949 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RETP07949 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.04□□□□□ -1.6
RETP07949 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.04□□□□□ -1.6
RETP07949 MIR4472-2-201ENST00000582069 67 ntBASIC5.04□□□□□ -1.6
RETP07949 RN7SL690P-201ENST00000582087 240 ntBASIC5.04□□□□□ -1.6
RETP07949 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RETP07949 AC093765.1-201ENST00000603758 881 ntBASIC5.04□□□□□ -1.6
RETP07949 MLECP1-201ENST00000615893 709 ntBASIC5.04□□□□□ -1.6
RETP07949 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.04□□□□□ -1.6
RETP07949 AC100871.1-201ENST00000507871 1456 ntBASIC5.04□□□□□ -1.6
RETP07949 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RETP07949 Z95327.2-201ENST00000414579 1873 ntBASIC5.04□□□□□ -1.6
RETP07949 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
RETP07949 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.04□□□□□ -1.6
RETP07949 DHX40P1-201ENST00000588725 1412 ntBASIC5.04□□□□□ -1.6
RETP07949 IQCB2P-201ENST00000401788 1633 ntBASIC5.04□□□□□ -1.6
RETP07949 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RETP07949 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RETP07949 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RETP07949 AC104118.1-201ENST00000607625 1589 ntBASIC5.04□□□□□ -1.6
RETP07949 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RETP07949 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.03□□□□□ -1.6
RETP07949 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RETP07949 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RETP07949 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
RETP07949 RNU1-85P-201ENST00000364127 164 ntBASIC5.03□□□□□ -1.6
RETP07949 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.03□□□□□ -1.6
RETP07949 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
RETP07949 AL034379.1-201ENST00000423216 253 ntBASIC5.03□□□□□ -1.6
RETP07949 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.03□□□□□ -1.6
RETP07949 KCTD10P1-201ENST00000434203 625 ntBASIC5.03□□□□□ -1.6
RETP07949 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.03□□□□□ -1.6
RETP07949 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.03□□□□□ -1.6
RETP07949 AL136455.1-201ENST00000441083 1240 ntBASIC5.03□□□□□ -1.6
RETP07949 AL157385.1-201ENST00000446973 268 ntBASIC5.03□□□□□ -1.6
RETP07949 EIF2S2P2-201ENST00000447161 982 ntBASIC5.03□□□□□ -1.6
RETP07949 AL354714.3-201ENST00000447284 493 ntBASIC5.03□□□□□ -1.6
RETP07949 AC114982.2-201ENST00000461396 358 ntBASIC5.03□□□□□ -1.6
RETP07949 RN7SL41P-201ENST00000476144 297 ntBASIC5.03□□□□□ -1.6
RETP07949 AC093827.1-201ENST00000480094 861 ntBASIC5.03□□□□□ -1.6
RETP07949 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.03□□□□□ -1.6
RETP07949 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.03□□□□□ -1.6
RETP07949 ENPP7P9-201ENST00000514456 627 ntBASIC5.03□□□□□ -1.6
RETP07949 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.03□□□□□ -1.6
RETP07949 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.03□□□□□ -1.6
RETP07949 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.03□□□□□ -1.6
RETP07949 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.03□□□□□ -1.6
RETP07949 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.03□□□□□ -1.6
RETP07949 MIR3160-1-201ENST00000577972 85 ntBASIC5.03□□□□□ -1.6
RETP07949 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RETP07949 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.03□□□□□ -1.6
RETP07949 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms