Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 AF228730.7-203ENST00000641436 1804 ntBASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-1Q9BYR8 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AL022163.1-201ENST00000430261 1569 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC087203.2-201ENST00000526502 1587 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 LRRC2-AS1-201ENST00000599511 2291 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 FLJ42393-201ENST00000623801 2270 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AL096816.1-201ENST00000623300 2920 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 MTND5P6-201ENST00000422338 1798 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 OR7E122P-202ENST00000641144 6171 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 Y_RNA.29-201ENST00000362570 113 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU6-770P-201ENST00000363929 105 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 Y_RNA.222-201ENST00000364264 102 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 ENSA-209ENST00000369016 923 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU6-432P-201ENST00000384196 109 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU6-662P-201ENST00000384253 104 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORA24.1-201ENST00000384401 135 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU6-1127P-201ENST00000384580 107 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORA41-201ENST00000384675 132 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU6-550P-201ENST00000391057 101 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 COX6A1P3-201ENST00000404167 293 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORA73.3-201ENST00000410213 189 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 GJA6P-201ENST00000415117 1042 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RPLP0P7-201ENST00000416050 667 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RBMY1KP-201ENST00000423480 476 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AL590632.1-201ENST00000424289 371 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RPL23AP69-201ENST00000431134 458 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 HIGD1AP11-201ENST00000438361 280 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RPS26P56-201ENST00000444468 240 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 IFNWP5-201ENST00000445100 588 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC005840.2-201ENST00000447193 355 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 FTH1P25-201ENST00000447665 469 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RPS29P16-201ENST00000452798 171 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC019080.2-201ENST00000453859 394 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC016700.3-201ENST00000455541 448 ntTSL 3 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AL109809.3-201ENST00000456875 246 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RPS27P12-201ENST00000464146 258 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 RN7SL598P-201ENST00000494391 294 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AL139099.1-201ENST00000497398 403 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 GSTO3P-201ENST00000504733 718 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC024451.1-201ENST00000508013 779 ntBASIC4.1□□□□□ -1.75
KRTAP3-1Q9BYR8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms