Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MIR1302-1-201ENST00000637932 143 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC132825.3-201ENST00000562182 4710 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL159987.1-201ENST00000347911 293 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 RNU6-1027P-201ENST00000383998 107 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CAPNS1P1-201ENST00000401029 633 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 RPL34P19-201ENST00000415903 342 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CENPIP1-201ENST00000425713 902 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC005300.1-201ENST00000428401 373 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MRPL35P4-201ENST00000453682 566 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC016925.1-201ENST00000458303 298 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 RN7SL814P-201ENST00000487715 300 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC109481.1-201ENST00000509173 282 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL117351.2-201ENST00000513571 157 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MRPS16P1-201ENST00000523462 412 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 OR11H5P-201ENST00000554039 926 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL356752.1-201ENST00000615844 593 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC006133.1-201ENST00000617106 264 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AP003072.5-201ENST00000623872 773 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CR381653.2-201ENST00000624041 768 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 NCOA4P3-201ENST00000513203 1877 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 SLIT2-212ENST00000622093 6380 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL596244.1-201ENST00000567068 3779 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL353807.3-201ENST00000500626 2505 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 TRAV35-201ENST00000390462 330 ntBASIC1.84□□□□□ -2.12
HMCN1Q96RW7 RNU6-1250P-201ENST00000391218 107 ntBASIC1.84□□□□□ -2.12
HMCN1Q96RW7 OR4K12P-201ENST00000406538 961 ntBASIC1.84□□□□□ -2.12
HMCN1Q96RW7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 ZNF965P-201ENST00000432501 817 ntBASIC1.84□□□□□ -2.12
HMCN1Q96RW7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.84□□□□□ -2.12
HMCN1Q96RW7 AC008072.1-201ENST00000434254 824 ntBASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms