Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 AC120338.1-201ENST00000625074 1541 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 BTF3P6-201ENST00000448054 499 ntBASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 SCARNA10-201ENST00000459255 330 ntBASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 MIR3158-1-201ENST00000583596 81 ntBASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 AC002044.3-201ENST00000623314 541 ntBASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 AC011815.3-201ENST00000624194 473 ntBASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 AC112200.1-201ENST00000625015 234 ntBASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 BCORP1-203ENST00000513194 5093 ntBASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHANK2Q9UPX8 SDHCP2-201ENST00000398565 501 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 CKS1BP6-201ENST00000424932 240 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 OR4C10P-201ENST00000434991 931 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 FHP1-201ENST00000442741 703 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 RPL7AP52-201ENST00000458096 790 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 RPL23AP24-201ENST00000458203 385 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 RPL7P19-201ENST00000469948 618 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC104763.1-201ENST00000475274 360 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 FKBP1BP1-201ENST00000553366 325 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC069061.3-201ENST00000582254 823 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC008549.2-201ENST00000333482 706 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 MIR670-201ENST00000390142 98 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 ATP5F1P3-201ENST00000397213 657 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 ATP5F1P2-201ENST00000398143 760 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 OR1F12-201ENST00000402365 945 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 TMBIM7P-201ENST00000418074 855 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC104333.2-201ENST00000422630 192 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 RPL34P6-201ENST00000432390 345 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 RHEBP2-201ENST00000450289 600 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 MIR2116-201ENST00000517221 80 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC022916.3-201ENST00000592961 742 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 AC090948.1-201ENST00000607464 549 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 RNA5SP196-201ENST00000625967 102 ntBASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.98□□□□□ -1.29
SHANK2Q9UPX8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AC114755.5-201ENST00000447760 831 ntBASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AL358232.1-201ENST00000448030 501 ntBASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AC093166.2-201ENST00000455969 1017 ntBASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AK4P6-201ENST00000505168 528 ntBASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AP000889.1-201ENST00000530968 660 ntBASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 AC090948.2-201ENST00000607363 564 ntBASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHANK2Q9UPX8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.96□□□□□ -1.29
SHANK2Q9UPX8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.96□□□□□ -1.29
SHANK2Q9UPX8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms