RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
LINC01340-201ENST00000504012 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
LINC01340-201ENST00000504012 SENP3Q9H4L4 574 aaPredicted RBP11.24□□□□□ -0.61
LINC01340-201ENST00000504012 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
LINC01340-201ENST00000504012 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
LINC01340-201ENST00000504012 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
LINC01340-201ENST00000504012 FOXD1Q16676 465 aa10.54□□□□□ -0.72
LINC01340-201ENST00000504012 MYT1Q01538 1121 aa10.49□□□□□ -0.73
LINC01340-201ENST00000504012 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
LINC01340-201ENST00000504012 HRCP23327 699 aa10.13□□□□□ -0.79
LINC01340-201ENST00000504012 NISCHQ9Y2I1 1504 aa10.07□□□□□ -0.8
LINC01340-201ENST00000504012 TTBK1Q5TCY1 1321 aaPredicted RBP10.05□□□□□ -0.8
LINC01340-201ENST00000504012 MSH5O43196 834 aa9.85□□□□□ -0.83
LINC01340-201ENST00000504012 PLPPR3Q6T4P5 718 aa9.81□□□□□ -0.84
LINC01340-201ENST00000504012 PIAS4Q8N2W9 510 aaPredicted RBP9.79□□□□□ -0.84
LINC01340-201ENST00000504012 PPP6R1Q9UPN7 881 aa9.76□□□□□ -0.85
LINC01340-201ENST00000504012 ADRA2BP18089 450 aa9.71□□□□□ -0.86
LINC01340-201ENST00000504012 SCAF1Q9H7N4 1312 aaKnown RBP9.65□□□□□ -0.86
LINC01340-201ENST00000504012 DAXXQ9UER7 740 aaPredicted RBP9.65□□□□□ -0.86
LINC01340-201ENST00000504012 ZEB1P37275 1124 aaPredicted RBP9.58□□□□□ -0.88
LINC01340-201ENST00000504012 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
LINC01340-201ENST00000504012 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
LINC01340-201ENST00000504012 DCAF1Q9Y4B6 1507 aa9.49□□□□□ -0.89
LINC01340-201ENST00000504012 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
LINC01340-201ENST00000504012 NCBP3Q53F19 620 aaKnown RBP9.4□□□□□ -0.9
LINC01340-201ENST00000504012 CCDC180Q9P1Z9 1646 aa9.39□□□□□ -0.91
LINC01340-201ENST00000504012 CENPBP07199 599 aaPredicted RBP9.37□□□□□ -0.91
LINC01340-201ENST00000504012 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
LINC01340-201ENST00000504012 EHMT2Q96KQ7 1210 aa9.36□□□□□ -0.91
LINC01340-201ENST00000504012 TRIM26Q12899 539 aaPredicted RBP9.34□□□□□ -0.91
LINC01340-201ENST00000504012 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
LINC01340-201ENST00000504012 BCL11AQ9H165 835 aa9.3□□□□□ -0.92
LINC01340-201ENST00000504012 AMER1Q5JTC6 1135 aaPredicted RBP9.26□□□□□ -0.93
LINC01340-201ENST00000504012 APLP2Q06481 763 aa9.25□□□□□ -0.93
LINC01340-201ENST00000504012 NEUROD1Q13562 356 aa9.24□□□□□ -0.93
LINC01340-201ENST00000504012 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
LINC01340-201ENST00000504012 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
LINC01340-201ENST00000504012 RTN4Q9NQC3 1192 aaKnown RBP9.19□□□□□ -0.94
LINC01340-201ENST00000504012 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
LINC01340-201ENST00000504012 ANP32EQ9BTT0 268 aa9.15□□□□□ -0.94
LINC01340-201ENST00000504012 ARXQ96QS3 562 aa9.14□□□□□ -0.95
LINC01340-201ENST00000504012 CLSPNQ9HAW4 1339 aa9.13□□□□□ -0.95
LINC01340-201ENST00000504012 DIEXFQ68CQ4 756 aaKnown RBP8.99□□□□□ -0.97
LINC01340-201ENST00000504012 SUPT5HO00267 1087 aaKnown RBP8.98□□□□□ -0.97
LINC01340-201ENST00000504012 MAPK8IP2Q13387 824 aaPredicted RBP8.97□□□□□ -0.97
LINC01340-201ENST00000504012 CACNB1Q02641 598 aaPredicted RBP8.96□□□□□ -0.98
LINC01340-201ENST00000504012 TRIM41Q8WV44 630 aa8.92□□□□□ -0.98
LINC01340-201ENST00000504012 MYT1LQ9UL68 1186 aa8.91□□□□□ -0.98
LINC01340-201ENST00000504012 DMRT2Q9Y5R5 561 aa8.91□□□□□ -0.98
LINC01340-201ENST00000504012 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.98
LINC01340-201ENST00000504012 CSRNP3Q8WYN3 585 aa8.9□□□□□ -0.98
LINC01340-201ENST00000504012 TSHZ2Q9NRE2 1034 aa8.85□□□□□ -0.99
LINC01340-201ENST00000504012 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
LINC01340-201ENST00000504012 ZNF316A6NFI3 1004 aaPredicted RBP8.82□□□□□ -1
LINC01340-201ENST00000504012 KCNA4P22459 653 aa8.8□□□□□ -1
LINC01340-201ENST00000504012 HOMEZQ8IX15 550 aa8.79□□□□□ -1
LINC01340-201ENST00000504012 ERICH6BQ5W0A0 696 aa8.77□□□□□ -1.01
LINC01340-201ENST00000504012 SUPT16HQ9Y5B9 1047 aaKnown RBP8.76□□□□□ -1.01
LINC01340-201ENST00000504012 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
LINC01340-201ENST00000504012 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
LINC01340-201ENST00000504012 UBE2Q2Q8WVN8 375 aa8.72□□□□□ -1.01
LINC01340-201ENST00000504012 TIMELESSQ9UNS1 1208 aa8.72□□□□□ -1.01
LINC01340-201ENST00000504012 BCANQ96GW7 911 aa8.68□□□□□ -1.02
LINC01340-201ENST00000504012 TAOK2Q9UL54 1235 aa8.67□□□□□ -1.02
LINC01340-201ENST00000504012 MIER1Q8N108 512 aa8.66□□□□□ -1.02
LINC01340-201ENST00000504012 FANCIQ9NVI1 1328 aa8.64□□□□□ -1.03
LINC01340-201ENST00000504012 ZCCHC6Q5VYS8 1495 aaKnown RBP8.64□□□□□ -1.03
LINC01340-201ENST00000504012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.62□□□□□ -1.03
LINC01340-201ENST00000504012 YTHDC1Q96MU7 727 aaKnown RBP8.61□□□□□ -1.03
LINC01340-201ENST00000504012 RBM19Q9Y4C8 960 aaKnown RBP8.61□□□□□ -1.03
LINC01340-201ENST00000504012 TULP1O00294 542 aaPredicted RBP8.6□□□□□ -1.03
LINC01340-201ENST00000504012 EIF5BO60841 1220 aaKnown RBP8.6□□□□□ -1.03
LINC01340-201ENST00000504012 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
LINC01340-201ENST00000504012 ANO8Q9HCE9 1232 aaPredicted RBP8.57□□□□□ -1.04
LINC01340-201ENST00000504012 DCAF8L1A6NGE4 600 aa8.53□□□□□ -1.04
LINC01340-201ENST00000504012 HOXD11P31277 338 aaPredicted RBP8.53□□□□□ -1.04
LINC01340-201ENST00000504012 DEKP35659 375 aaKnown RBP8.53□□□□□ -1.04
LINC01340-201ENST00000504012 WRNQ14191 1432 aaPredicted RBP eCLIP8.53□□□□□ -1.04
LINC01340-201ENST00000504012 POTEHQ6S545 545 aa8.52□□□□□ -1.05
LINC01340-201ENST00000504012 CNKSR2Q8WXI2 1034 aa8.45□□□□□ -1.06
LINC01340-201ENST00000504012 PODXL2Q9NZ53 605 aa8.45□□□□□ -1.06
LINC01340-201ENST00000504012 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
LINC01340-201ENST00000504012 TPRNQ4KMQ1 711 aa8.44□□□□□ -1.06
LINC01340-201ENST00000504012 RNF39Q9H2S5 420 aa8.44□□□□□ -1.06
LINC01340-201ENST00000504012 NEFLP07196 543 aa8.42□□□□□ -1.06
LINC01340-201ENST00000504012 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
LINC01340-201ENST00000504012 RNF216Q9NWF9 866 aaPredicted RBP8.42□□□□□ -1.06
LINC01340-201ENST00000504012 FBXO3Q9UK99 471 aa8.42□□□□□ -1.06
LINC01340-201ENST00000504012 KLHL34Q8N239 644 aa8.41□□□□□ -1.06
LINC01340-201ENST00000504012 PKNOX2Q96KN3 472 aa8.4□□□□□ -1.06
LINC01340-201ENST00000504012 C11orf95C9JLR9 678 aaPredicted RBP8.39□□□□□ -1.07
LINC01340-201ENST00000504012 FKBP8Q14318 412 aa8.38□□□□□ -1.07
LINC01340-201ENST00000504012 CDK11AQ9UQ88 783 aaPredicted RBP8.38□□□□□ -1.07
LINC01340-201ENST00000504012 SLC4A1APQ9BWU0 796 aaKnown RBP8.35□□□□□ -1.07
LINC01340-201ENST00000504012 GLIPR1L2Q4G1C9 344 aa8.34□□□□□ -1.07
LINC01340-201ENST00000504012 NPM2Q86SE8 214 aaKnown RBP8.33□□□□□ -1.08
LINC01340-201ENST00000504012 USP35Q9P2H5 1018 aa8.31□□□□□ -1.08
LINC01340-201ENST00000504012 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
LINC01340-201ENST00000504012 NOP58Q9Y2X3 529 aaKnown RBP8.3□□□□□ -1.08
LINC01340-201ENST00000504012 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms