RNA–Protein interactions for RNA: ENST00000588782.1

LINC01028-202, Transcript of long intergenic non-protein coding RNA 1028, humanhuman

TSL 3 BASIC

Gene LINC01028, Length 458 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01028-202ENST00000588782 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
LINC01028-202ENST00000588782 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
LINC01028-202ENST00000588782 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
LINC01028-202ENST00000588782 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
LINC01028-202ENST00000588782 FOXD1Q16676 465 aa15.85■□□□□ 0.13
LINC01028-202ENST00000588782 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
LINC01028-202ENST00000588782 MSH5O43196 834 aa14.96□□□□□ -0.01
LINC01028-202ENST00000588782 PIAS4Q8N2W9 510 aaPredicted RBP14.84□□□□□ -0.03
LINC01028-202ENST00000588782 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.05
LINC01028-202ENST00000588782 ADRA2BP18089 450 aa14.74□□□□□ -0.05
LINC01028-202ENST00000588782 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
LINC01028-202ENST00000588782 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
LINC01028-202ENST00000588782 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
LINC01028-202ENST00000588782 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
LINC01028-202ENST00000588782 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
LINC01028-202ENST00000588782 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
LINC01028-202ENST00000588782 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
LINC01028-202ENST00000588782 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
LINC01028-202ENST00000588782 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
LINC01028-202ENST00000588782 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
LINC01028-202ENST00000588782 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
LINC01028-202ENST00000588782 DNAJC5BQ9UF47 199 aa12.72□□□□□ -0.37
LINC01028-202ENST00000588782 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
LINC01028-202ENST00000588782 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
LINC01028-202ENST00000588782 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
LINC01028-202ENST00000588782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC01028-202ENST00000588782 KCNA4P22459 653 aa12.31□□□□□ -0.44
LINC01028-202ENST00000588782 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
LINC01028-202ENST00000588782 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
LINC01028-202ENST00000588782 APLP2Q06481 763 aa11.98□□□□□ -0.49
LINC01028-202ENST00000588782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
LINC01028-202ENST00000588782 CAPN15O75808 1086 aa11.95□□□□□ -0.5
LINC01028-202ENST00000588782 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
LINC01028-202ENST00000588782 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
LINC01028-202ENST00000588782 DSG3P32926 999 aa11.88□□□□□ -0.51
LINC01028-202ENST00000588782 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
LINC01028-202ENST00000588782 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
LINC01028-202ENST00000588782 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
LINC01028-202ENST00000588782 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
LINC01028-202ENST00000588782 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
LINC01028-202ENST00000588782 ABCB7O75027 752 aa11.61□□□□□ -0.55
LINC01028-202ENST00000588782 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
LINC01028-202ENST00000588782 POLA2Q14181 598 aa11.45□□□□□ -0.58
LINC01028-202ENST00000588782 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
LINC01028-202ENST00000588782 POTEHQ6S545 545 aa11.37□□□□□ -0.59
LINC01028-202ENST00000588782 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
LINC01028-202ENST00000588782 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
LINC01028-202ENST00000588782 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
LINC01028-202ENST00000588782 ZBTB22O15209 634 aa11.27□□□□□ -0.61
LINC01028-202ENST00000588782 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
LINC01028-202ENST00000588782 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
LINC01028-202ENST00000588782 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
LINC01028-202ENST00000588782 FBLN2P98095 1184 aa11.02□□□□□ -0.65
LINC01028-202ENST00000588782 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
LINC01028-202ENST00000588782 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
LINC01028-202ENST00000588782 SPDYE6P0CI01 402 aa10.93□□□□□ -0.66
LINC01028-202ENST00000588782 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
LINC01028-202ENST00000588782 PITPNM1O00562 1244 aa10.83□□□□□ -0.68
LINC01028-202ENST00000588782 PIP4P2Q8N4L2 257 aa10.81□□□□□ -0.68
LINC01028-202ENST00000588782 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
LINC01028-202ENST00000588782 CSRNP3Q8WYN3 585 aa10.8□□□□□ -0.68
LINC01028-202ENST00000588782 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC01028-202ENST00000588782 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
LINC01028-202ENST00000588782 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
LINC01028-202ENST00000588782 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
LINC01028-202ENST00000588782 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
LINC01028-202ENST00000588782 CLEC11AQ9Y240 323 aa10.65□□□□□ -0.7
LINC01028-202ENST00000588782 HAX1O00165 279 aa10.64□□□□□ -0.71
LINC01028-202ENST00000588782 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
LINC01028-202ENST00000588782 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
LINC01028-202ENST00000588782 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC01028-202ENST00000588782 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
LINC01028-202ENST00000588782 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
LINC01028-202ENST00000588782 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
LINC01028-202ENST00000588782 EVX2Q03828 476 aa10.4□□□□□ -0.74
LINC01028-202ENST00000588782 CHADLQ6NUI6 762 aa10.38□□□□□ -0.75
LINC01028-202ENST00000588782 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
LINC01028-202ENST00000588782 NISCHQ9Y2I1 1504 aa10.33□□□□□ -0.76
LINC01028-202ENST00000588782 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
LINC01028-202ENST00000588782 CLCN6P51797 869 aa10.29□□□□□ -0.76
LINC01028-202ENST00000588782 GABBR2O75899 941 aa10.25□□□□□ -0.77
LINC01028-202ENST00000588782 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
LINC01028-202ENST00000588782 CREBZFQ9NS37 354 aa10.21□□□□□ -0.77
LINC01028-202ENST00000588782 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC01028-202ENST00000588782 PROM2Q8N271 834 aa10.13□□□□□ -0.79
LINC01028-202ENST00000588782 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
LINC01028-202ENST00000588782 ZNF579Q8NAF0 562 aaKnown RBP10.11□□□□□ -0.79
LINC01028-202ENST00000588782 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
LINC01028-202ENST00000588782 ABCC9O60706 1549 aa10.09□□□□□ -0.79
LINC01028-202ENST00000588782 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
LINC01028-202ENST00000588782 DCBLD2Q96PD2 775 aa10.03□□□□□ -0.8
LINC01028-202ENST00000588782 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
LINC01028-202ENST00000588782 LHX8Q68G74 356 aa10.01□□□□□ -0.81
LINC01028-202ENST00000588782 POTEIP0CG38 1075 aa9.97□□□□□ -0.81
LINC01028-202ENST00000588782 GALR2O43603 387 aaPredicted RBP9.91□□□□□ -0.82
LINC01028-202ENST00000588782 MIER1Q8N108 512 aa9.91□□□□□ -0.82
LINC01028-202ENST00000588782 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
LINC01028-202ENST00000588782 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
LINC01028-202ENST00000588782 PLCD3Q8N3E9 789 aa9.83□□□□□ -0.84
LINC01028-202ENST00000588782 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms