Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 RNA5SP107-201ENST00000411358 122 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.33□□□□□ -1.08
NUBP1P53384 OSTCP4-201ENST00000424397 449 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 AL389925.1-201ENST00000432257 728 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 AC108039.2-201ENST00000440214 359 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 AC239860.1-201ENST00000444680 1270 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC8.33□□□□□ -1.08
NUBP1P53384 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
NUBP1P53384 AC022730.1-201ENST00000473114 568 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 AC005726.1-201ENST00000494679 427 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 RN7SL182P-201ENST00000496499 300 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.33□□□□□ -1.08
NUBP1P53384 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC8.33□□□□□ -1.08
NUBP1P53384 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 IGKV2-23-201ENST00000518729 323 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.33□□□□□ -1.08
NUBP1P53384 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.33□□□□□ -1.08
NUBP1P53384 BMS1P2-202ENST00000532854 1858 ntTSL 5 BASIC8.33□□□□□ -1.08
NUBP1P53384 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.33□□□□□ -1.08
NUBP1P53384 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.33□□□□□ -1.08
NUBP1P53384 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC8.33□□□□□ -1.08
NUBP1P53384 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC8.33□□□□□ -1.08
NUBP1P53384 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.33□□□□□ -1.08
NUBP1P53384 AL352984.2-202ENST00000613699 155 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC8.33□□□□□ -1.08
NUBP1P53384 AL034408.1-201ENST00000637712 664 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 GAREM1-201ENST00000269209 3006 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
NUBP1P53384 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 AL591543.1-202ENST00000642095 4149 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
NUBP1P53384 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 TRIM51-202ENST00000449290 1629 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.32□□□□□ -1.08
NUBP1P53384 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
NUBP1P53384 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC8.32□□□□□ -1.08
NUBP1P53384 AC130650.2-201ENST00000618736 2403 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 DAZ3-203ENST00000446723 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 DAZ2-209ENST00000449947 3372 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC8.32□□□□□ -1.08
NUBP1P53384 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
NUBP1P53384 RNU2-33P-201ENST00000410344 192 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 RNA5SP178-201ENST00000410380 128 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 RNU2-51P-201ENST00000410708 197 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 RN7SKP251-201ENST00000410830 314 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 RPL36P19-201ENST00000430744 301 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 RPL3P10-201ENST00000476002 1164 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 OR9A1P-202ENST00000484361 945 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 RN7SL416P-201ENST00000494042 298 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 TECRP2-201ENST00000503270 928 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.32□□□□□ -1.08
NUBP1P53384 AP003396.4-201ENST00000527574 265 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.32□□□□□ -1.08
NUBP1P53384 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.32□□□□□ -1.08
NUBP1P53384 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC8.32□□□□□ -1.08
NUBP1P53384 AC139085.1-201ENST00000582716 182 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.32□□□□□ -1.08
NUBP1P53384 AC016582.3-206ENST00000636547 207 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 AL354702.2-202ENST00000641481 890 ntBASIC8.32□□□□□ -1.08
NUBP1P53384 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.32□□□□□ -1.08
NUBP1P53384 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NUBP1P53384 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
NUBP1P53384 CD302-204ENST00000553424 3866 ntTSL 2 BASIC8.31□□□□□ -1.08
NUBP1P53384 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms