Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 AC007954.1-201ENST00000554198 494 ntBASIC6.96□□□□□ -1.3
USP11P51784 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 RN7SL261P-201ENST00000613441 282 ntBASIC6.96□□□□□ -1.3
USP11P51784 AC007014.2-201ENST00000615581 479 ntBASIC6.96□□□□□ -1.3
USP11P51784 U4.5-201ENST00000617137 123 ntBASIC6.96□□□□□ -1.3
USP11P51784 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.96□□□□□ -1.3
USP11P51784 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.96□□□□□ -1.3
USP11P51784 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 RBMY1HP-201ENST00000382759 1389 ntBASIC6.95□□□□□ -1.3
USP11P51784 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.95□□□□□ -1.3
USP11P51784 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.95□□□□□ -1.3
USP11P51784 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.95□□□□□ -1.3
USP11P51784 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 MTND5P17-201ENST00000418405 1603 ntBASIC6.95□□□□□ -1.3
USP11P51784 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 AP000432.2-201ENST00000624164 2048 ntBASIC6.95□□□□□ -1.3
USP11P51784 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.95□□□□□ -1.3
USP11P51784 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 RNU4-76P-201ENST00000364509 141 ntBASIC6.95□□□□□ -1.3
USP11P51784 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.95□□□□□ -1.3
USP11P51784 LCN1P2-201ENST00000372030 223 ntBASIC6.95□□□□□ -1.3
USP11P51784 AL451142.1-201ENST00000375867 775 ntBASIC6.95□□□□□ -1.3
USP11P51784 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 GSTA12P-201ENST00000402398 508 ntBASIC6.95□□□□□ -1.3
USP11P51784 AC245096.1-201ENST00000413104 546 ntBASIC6.95□□□□□ -1.3
USP11P51784 USP9YP6-201ENST00000413550 854 ntBASIC6.95□□□□□ -1.3
USP11P51784 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 RPS15AP30-201ENST00000420976 390 ntBASIC6.95□□□□□ -1.3
USP11P51784 CYCSP46-201ENST00000423569 204 ntBASIC6.95□□□□□ -1.3
USP11P51784 RPL21P43-201ENST00000425440 472 ntBASIC6.95□□□□□ -1.3
USP11P51784 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.95□□□□□ -1.3
USP11P51784 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 USP9YP34-201ENST00000453983 808 ntBASIC6.95□□□□□ -1.3
USP11P51784 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 GAPDHP36-201ENST00000480688 918 ntBASIC6.95□□□□□ -1.3
USP11P51784 AC016687.1-201ENST00000482574 353 ntBASIC6.95□□□□□ -1.3
USP11P51784 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 PRMT5P1-201ENST00000514351 598 ntBASIC6.95□□□□□ -1.3
USP11P51784 CYP4F27P-201ENST00000514557 494 ntBASIC6.95□□□□□ -1.3
USP11P51784 HNRNPKP5-201ENST00000515300 253 ntBASIC6.95□□□□□ -1.3
USP11P51784 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
USP11P51784 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.95□□□□□ -1.3
USP11P51784 RNU4ATAC-201ENST00000580972 127 ntBASIC6.95□□□□□ -1.3
USP11P51784 FGF7P1-201ENST00000582820 288 ntBASIC6.95□□□□□ -1.3
USP11P51784 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 AC068768.2-201ENST00000602352 343 ntBASIC6.95□□□□□ -1.3
USP11P51784 AL159169.2-201ENST00000610061 1269 ntBASIC6.95□□□□□ -1.3
USP11P51784 AC092266.1-201ENST00000610958 165 ntBASIC6.95□□□□□ -1.3
USP11P51784 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 AC073488.3-201ENST00000631611 778 ntBASIC6.95□□□□□ -1.3
USP11P51784 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
USP11P51784 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.95□□□□□ -1.3
USP11P51784 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USP11P51784 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
USP11P51784 AL354854.1-201ENST00000455940 1363 ntBASIC6.95□□□□□ -1.3
USP11P51784 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
USP11P51784 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.94□□□□□ -1.3
USP11P51784 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.94□□□□□ -1.3
USP11P51784 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.94□□□□□ -1.3
USP11P51784 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms