Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 AC009947.2-201ENST00000444014 672 ntBASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN10AQ9Y5Y9 AC073314.1-201ENST00000568729 2216 ntBASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 DUSP5P1-201ENST00000441325 1139 ntBASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN10AQ9Y5Y9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 PCED1CP-201ENST00000419887 785 ntBASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 AP005212.1-201ENST00000581547 1997 ntBASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCN10AQ9Y5Y9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 KRT18P38-201ENST00000449496 1282 ntBASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 AL671277.2-201ENST00000458060 996 ntBASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 PRSS44-201ENST00000515154 1146 ntBASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 KRT8P11-201ENST00000409686 1436 ntBASIC21.41■■□□□ 1.02
SCN10AQ9Y5Y9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms