Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 KRT18P29-201ENST00000397031 1267 ntBASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 UNC93B5-201ENST00000530315 699 ntBASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGB3Q9Y5G1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHGB3Q9Y5G1 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.46■□□□□ 0.54
PCDHGB3Q9Y5G1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHGB3Q9Y5G1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
PCDHGB3Q9Y5G1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHGB3Q9Y5G1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 AC060766.5-201ENST00000590539 871 ntBASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 PHGDH-210ENST00000641115 1638 ntBASIC18.45■□□□□ 0.54
PCDHGB3Q9Y5G1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 ESRRAP1-201ENST00000400596 1257 ntBASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms