Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 RCN1P1-201ENST00000400413 996 ntBASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB1Q9Y5F3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PCDHB1Q9Y5F3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHB1Q9Y5F3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PCDHB1Q9Y5F3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHB1Q9Y5F3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PCDHB1Q9Y5F3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 TFP1-202ENST00000475455 1573 ntBASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB1Q9Y5F3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 TREX1-205ENST00000625293 1783 ntBASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 AL121906.2-201ENST00000621597 723 ntBASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDHB1Q9Y5F3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 RARRES2P10-201ENST00000564312 460 ntBASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 AC012306.2-201ENST00000609350 630 ntBASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 AC097493.4-201ENST00000641197 219 ntBASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms