Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 NIFKP9-201ENST00000419265 221 ntBASIC20.99■□□□□ 0.95
USP15Q9Y4E8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 KRT16P1-201ENST00000399124 1418 ntBASIC20.98■□□□□ 0.95
USP15Q9Y4E8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 AC006011.2-201ENST00000621313 1158 ntBASIC20.98■□□□□ 0.95
USP15Q9Y4E8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP15Q9Y4E8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP15Q9Y4E8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 AC087289.5-201ENST00000586076 3175 ntBASIC20.96■□□□□ 0.95
USP15Q9Y4E8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 LIN28AP1-201ENST00000429574 405 ntBASIC20.96■□□□□ 0.95
USP15Q9Y4E8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP15Q9Y4E8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.95■□□□□ 0.94
USP15Q9Y4E8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.95■□□□□ 0.94
USP15Q9Y4E8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.95■□□□□ 0.94
USP15Q9Y4E8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP15Q9Y4E8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms