Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
PKP3Q9Y446 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.58■□□□□ 0.73
PKP3Q9Y446 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
PKP3Q9Y446 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PKP3Q9Y446 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PKP3Q9Y446 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.58■□□□□ 0.73
PKP3Q9Y446 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PKP3Q9Y446 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
PKP3Q9Y446 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PKP3Q9Y446 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PKP3Q9Y446 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PKP3Q9Y446 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.58■□□□□ 0.73
PKP3Q9Y446 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PKP3Q9Y446 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.73
PKP3Q9Y446 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 AC004264.1-201ENST00000608354 794 ntBASIC19.58■□□□□ 0.72
PKP3Q9Y446 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP3Q9Y446 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP3Q9Y446 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP3Q9Y446 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.57■□□□□ 0.72
PKP3Q9Y446 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP3Q9Y446 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP3Q9Y446 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
PKP3Q9Y446 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP3Q9Y446 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PKP3Q9Y446 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PKP3Q9Y446 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP3Q9Y446 KRASP1-201ENST00000407852 552 ntBASIC19.57■□□□□ 0.72
PKP3Q9Y446 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.57■□□□□ 0.72
PKP3Q9Y446 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PKP3Q9Y446 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.57■□□□□ 0.72
PKP3Q9Y446 TREX1-205ENST00000625293 1783 ntBASIC19.57■□□□□ 0.72
PKP3Q9Y446 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 TUBB8P6-201ENST00000436895 1288 ntBASIC19.56■□□□□ 0.72
PKP3Q9Y446 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.56■□□□□ 0.72
PKP3Q9Y446 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 AL158211.5-201ENST00000623583 2518 ntBASIC19.56■□□□□ 0.72
PKP3Q9Y446 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP3Q9Y446 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP3Q9Y446 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.55■□□□□ 0.72
PKP3Q9Y446 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKP3Q9Y446 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 KRT18P16-201ENST00000510337 1294 ntBASIC19.55■□□□□ 0.72
PKP3Q9Y446 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.55■□□□□ 0.72
PKP3Q9Y446 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKP3Q9Y446 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms