Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 AC018553.1-201ENST00000616682 1458 ntBASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZC3H4Q9UPT8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 AL645929.1-201ENST00000420084 975 ntBASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 NUS1P1-201ENST00000446295 882 ntBASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
ZC3H4Q9UPT8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZC3H4Q9UPT8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 SPDYE15P-201ENST00000424157 909 ntBASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 AC009078.2-202ENST00000463353 338 ntBASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.64■■□□□ 1.38
ZC3H4Q9UPT8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZC3H4Q9UPT8 AL137060.1-201ENST00000618151 2648 ntBASIC23.64■■□□□ 1.37
ZC3H4Q9UPT8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.64■■□□□ 1.37
ZC3H4Q9UPT8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.64■■□□□ 1.37
ZC3H4Q9UPT8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZC3H4Q9UPT8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZC3H4Q9UPT8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 TSSC2-201ENST00000450217 709 ntBASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 GCSHP2-201ENST00000560971 527 ntBASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 MIR3180-1-201ENST00000580374 94 ntBASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 MIR3180-3-201ENST00000584616 94 ntBASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.63■■□□□ 1.37
ZC3H4Q9UPT8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms