Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 MIR1224-201ENST00000408193 85 ntBASIC18■□□□□ 0.47
NPIPA1Q9UND3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 AP002982.1-201ENST00000492365 877 ntBASIC18■□□□□ 0.47
NPIPA1Q9UND3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 AC073195.1-201ENST00000607241 877 ntBASIC18■□□□□ 0.47
NPIPA1Q9UND3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA1Q9UND3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 KRT8P17-201ENST00000453110 1448 ntBASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA1Q9UND3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms