Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AL845331.1-201ENST00000424978 1190 ntBASIC21■□□□□ 0.95
CXXC1Q9P0U4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXXC1Q9P0U4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXXC1Q9P0U4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC1Q9P0U4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 MIR3652-201ENST00000579335 131 ntBASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CXXC1Q9P0U4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 AP000523.1-201ENST00000398242 1049 ntBASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 PRELID1P1-202ENST00000567272 903 ntBASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 FEM1AP4-201ENST00000443167 1987 ntBASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CXXC1Q9P0U4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 KRT8P41-201ENST00000533985 1514 ntBASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 UNC93B7-201ENST00000509439 705 ntBASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.96■□□□□ 0.95
CXXC1Q9P0U4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 AP000593.1-201ENST00000393668 712 ntBASIC20.95■□□□□ 0.94
CXXC1Q9P0U4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms