Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 YBX1P10-201ENST00000444752 975 ntBASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 RPPH1-201ENST00000516869 333 ntBASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 FAM197Y4-202ENST00000622692 608 ntBASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CUEDC1Q9NWM3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 TREX1-205ENST00000625293 1783 ntBASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CUEDC1Q9NWM3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUEDC1Q9NWM3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 AC133681.1-201ENST00000465482 601 ntBASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.84■□□□□ 0.61
CUEDC1Q9NWM3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms