Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM248Q9NWD8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 Z99916.2-201ENST00000604037 246 ntBASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 HLA-A-209ENST00000638375 975 ntBASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 AL158211.5-201ENST00000623583 2518 ntBASIC19.97■□□□□ 0.79
TMEM248Q9NWD8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 AC073195.1-201ENST00000607241 877 ntBASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 AC066615.1-201ENST00000640911 628 ntBASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM248Q9NWD8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.95■□□□□ 0.79
TMEM248Q9NWD8 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 MIR718-201ENST00000390190 70 ntBASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 KSR1P1-201ENST00000446298 240 ntBASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 AL445675.2-201ENST00000620291 557 ntBASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM248Q9NWD8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 AP001412.1-201ENST00000608405 714 ntBASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TMEM248Q9NWD8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms