Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 FAM201B-201ENST00000458407 597 ntBASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 AL032819.2-201ENST00000624543 2162 ntBASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.72■■□□□ 1.07
BLOC1S4Q9NUP1 AC104417.2-201ENST00000562989 1793 ntBASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 PRORSD1P-201ENST00000295112 541 ntBASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 C1QL1P1-201ENST00000568105 661 ntBASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BLOC1S4Q9NUP1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 ABHD17AP1-201ENST00000358206 933 ntBASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 AC110285.5-201ENST00000611501 352 ntBASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BLOC1S4Q9NUP1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 RPPH1-201ENST00000516869 333 ntBASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 C1QBPP2-201ENST00000528754 825 ntBASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BLOC1S4Q9NUP1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms