Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 C1QL1P1-201ENST00000568105 661 ntBASIC20.82■□□□□ 0.92
CISHQ9NSE2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
CISHQ9NSE2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CISHQ9NSE2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CISHQ9NSE2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CISHQ9NSE2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.79■□□□□ 0.92
CISHQ9NSE2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms