Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 KRT16P6-202ENST00000425692 1426 ntBASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.67■□□□□ 0.58
NECTIN3Q9NQS3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.66■□□□□ 0.58
NECTIN3Q9NQS3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 AC098590.1-201ENST00000468126 897 ntBASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 RN7SL471P-201ENST00000580476 299 ntBASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 AC004408.2-201ENST00000623613 2777 ntBASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 AC138932.1-201ENST00000534164 6830 ntBASIC18.65■□□□□ 0.58
NECTIN3Q9NQS3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NECTIN3Q9NQS3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
NECTIN3Q9NQS3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.64■□□□□ 0.58
NECTIN3Q9NQS3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.64■□□□□ 0.58
NECTIN3Q9NQS3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NECTIN3Q9NQS3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.64■□□□□ 0.58
NECTIN3Q9NQS3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 MTDHP1-201ENST00000605323 784 ntBASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms