Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 LINC01465-201ENST00000408887 1940 ntBASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.74■□□□□ 0.59
LRTM1Q9HBL6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 AC091874.3-201ENST00000512672 1195 ntBASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 AC006557.6-201ENST00000623071 864 ntBASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM1Q9HBL6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.72■□□□□ 0.59
LRTM1Q9HBL6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 SLC29A4P1-201ENST00000398760 971 ntBASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 AC124283.5-201ENST00000624661 1809 ntBASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRTM1Q9HBL6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms