Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS11Q9H270 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS11Q9H270 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.6■□□□□ 0.73
VPS11Q9H270 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.6■□□□□ 0.73
VPS11Q9H270 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.6■□□□□ 0.73
VPS11Q9H270 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS11Q9H270 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS11Q9H270 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS11Q9H270 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS11Q9H270 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VPS11Q9H270 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VPS11Q9H270 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS11Q9H270 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
VPS11Q9H270 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS11Q9H270 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 AC006015.1-201ENST00000429970 570 ntBASIC19.59■□□□□ 0.73
VPS11Q9H270 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS11Q9H270 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.59■□□□□ 0.73
VPS11Q9H270 AL589743.5-201ENST00000616611 1050 ntBASIC19.59■□□□□ 0.73
VPS11Q9H270 BID-214ENST00000617586 542 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS11Q9H270 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS11Q9H270 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
VPS11Q9H270 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VPS11Q9H270 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS11Q9H270 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS11Q9H270 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS11Q9H270 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
VPS11Q9H270 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.58■□□□□ 0.73
VPS11Q9H270 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
VPS11Q9H270 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VPS11Q9H270 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.58■□□□□ 0.73
VPS11Q9H270 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS11Q9H270 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS11Q9H270 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS11Q9H270 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS11Q9H270 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS11Q9H270 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.58■□□□□ 0.72
VPS11Q9H270 AC007322.1-201ENST00000426983 750 ntBASIC19.58■□□□□ 0.72
VPS11Q9H270 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.58■□□□□ 0.72
VPS11Q9H270 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS11Q9H270 C2orf69P4-201ENST00000565394 541 ntBASIC19.58■□□□□ 0.72
VPS11Q9H270 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS11Q9H270 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS11Q9H270 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS11Q9H270 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
VPS11Q9H270 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
VPS11Q9H270 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.58■□□□□ 0.72
VPS11Q9H270 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VPS11Q9H270 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS11Q9H270 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
VPS11Q9H270 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
VPS11Q9H270 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS11Q9H270 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.57■□□□□ 0.72
VPS11Q9H270 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS11Q9H270 AC231657.2-201ENST00000624556 255 ntBASIC19.57■□□□□ 0.72
VPS11Q9H270 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 AC010980.2-201ENST00000587099 1412 ntBASIC19.57■□□□□ 0.72
VPS11Q9H270 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS11Q9H270 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS11Q9H270 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms