Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 KRT18P68-201ENST00000392293 1000 ntBASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 AC034268.1-201ENST00000441047 882 ntBASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMSS1Q9BQ75 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CMSS1Q9BQ75 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 PHGDH-210ENST00000641115 1638 ntBASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 AC137761.2-201ENST00000561729 223 ntBASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 AC145350.3-201ENST00000569033 163 ntBASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CMSS1Q9BQ75 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms