Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LITAFQ99732 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LITAFQ99732 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.98□□□□□ -0.33
LITAFQ99732 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LITAFQ99732 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LITAFQ99732 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.98□□□□□ -0.33
LITAFQ99732 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC12.98□□□□□ -0.33
LITAFQ99732 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LITAFQ99732 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.98□□□□□ -0.33
LITAFQ99732 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
LITAFQ99732 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.98□□□□□ -0.33
LITAFQ99732 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.98□□□□□ -0.33
LITAFQ99732 AC009053.2-201ENST00000563701 2365 ntBASIC12.98□□□□□ -0.33
LITAFQ99732 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC12.98□□□□□ -0.33
LITAFQ99732 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 AICDA-202ENST00000537228 667 ntTSL 5 BASIC12.98□□□□□ -0.33
LITAFQ99732 AC126544.1-201ENST00000580842 1059 ntBASIC12.98□□□□□ -0.33
LITAFQ99732 AC233992.3-201ENST00000607491 485 ntBASIC12.98□□□□□ -0.33
LITAFQ99732 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.98□□□□□ -0.33
LITAFQ99732 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LITAFQ99732 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.98□□□□□ -0.33
LITAFQ99732 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LITAFQ99732 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
LITAFQ99732 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.97□□□□□ -0.33
LITAFQ99732 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.97□□□□□ -0.33
LITAFQ99732 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC12.97□□□□□ -0.33
LITAFQ99732 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.97□□□□□ -0.33
LITAFQ99732 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC12.97□□□□□ -0.33
LITAFQ99732 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 AL356652.1-201ENST00000615962 565 ntBASIC12.97□□□□□ -0.33
LITAFQ99732 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.97□□□□□ -0.33
LITAFQ99732 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LITAFQ99732 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LITAFQ99732 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LITAFQ99732 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.97□□□□□ -0.33
LITAFQ99732 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 ESPNP-201ENST00000270691 2015 ntBASIC12.96□□□□□ -0.33
LITAFQ99732 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LITAFQ99732 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms