Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL13Q99616 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 SLC25A24-204ENST00000569674 2357 ntBASIC16.35■□□□□ 0.21
CCL13Q99616 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CCL13Q99616 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.34■□□□□ 0.21
CCL13Q99616 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL13Q99616 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
CCL13Q99616 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCL13Q99616 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.34■□□□□ 0.21
CCL13Q99616 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCL13Q99616 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.34■□□□□ 0.21
CCL13Q99616 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL13Q99616 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.34■□□□□ 0.21
CCL13Q99616 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.34■□□□□ 0.21
CCL13Q99616 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCL13Q99616 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CCL13Q99616 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL13Q99616 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.34■□□□□ 0.21
CCL13Q99616 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCL13Q99616 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CCL13Q99616 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL13Q99616 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL13Q99616 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL13Q99616 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL13Q99616 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CCL13Q99616 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL13Q99616 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL13Q99616 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL13Q99616 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCL13Q99616 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL13Q99616 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL13Q99616 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCL13Q99616 KRT18P16-201ENST00000510337 1294 ntBASIC16.33■□□□□ 0.2
CCL13Q99616 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL13Q99616 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCL13Q99616 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.33■□□□□ 0.2
CCL13Q99616 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCL13Q99616 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL13Q99616 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCL13Q99616 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CCL13Q99616 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCL13Q99616 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCL13Q99616 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL13Q99616 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL13Q99616 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL13Q99616 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL13Q99616 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL13Q99616 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.33■□□□□ 0.2
CCL13Q99616 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL13Q99616 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL13Q99616 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL13Q99616 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCL13Q99616 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCL13Q99616 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCL13Q99616 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCL13Q99616 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 KRT16P5-201ENST00000455284 522 ntBASIC16.32■□□□□ 0.2
CCL13Q99616 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL13Q99616 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL13Q99616 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCL13Q99616 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.32■□□□□ 0.2
CCL13Q99616 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL13Q99616 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CCL13Q99616 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CCL13Q99616 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms