Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV9Q99603 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.2■□□□□ 0.02
TRGV9Q99603 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRGV9Q99603 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.2■□□□□ 0.02
TRGV9Q99603 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV9Q99603 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.2■□□□□ 0.02
TRGV9Q99603 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.2■□□□□ 0.02
TRGV9Q99603 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.2■□□□□ 0.02
TRGV9Q99603 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.2■□□□□ 0.02
TRGV9Q99603 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.2■□□□□ 0.02
TRGV9Q99603 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.2■□□□□ 0.02
TRGV9Q99603 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRGV9Q99603 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRGV9Q99603 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.2■□□□□ 0.02
TRGV9Q99603 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV9Q99603 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRGV9Q99603 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV9Q99603 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRGV9Q99603 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV9Q99603 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRGV9Q99603 AC141586.3-201ENST00000562166 1838 ntBASIC15.2■□□□□ 0.02
TRGV9Q99603 AL138781.2-201ENST00000617896 1843 ntBASIC15.2■□□□□ 0.02
TRGV9Q99603 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV9Q99603 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.19■□□□□ 0.02
TRGV9Q99603 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 AL390719.1-204ENST00000412397 1219 ntBASIC15.19■□□□□ 0.02
TRGV9Q99603 AC073210.2-201ENST00000430369 194 ntBASIC15.19■□□□□ 0.02
TRGV9Q99603 AC133552.2-202ENST00000575694 574 ntBASIC15.19■□□□□ 0.02
TRGV9Q99603 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV9Q99603 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV9Q99603 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.18■□□□□ 0.02
TRGV9Q99603 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.18■□□□□ 0.02
TRGV9Q99603 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRGV9Q99603 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.18■□□□□ 0.02
TRGV9Q99603 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.18■□□□□ 0.02
TRGV9Q99603 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRGV9Q99603 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.18■□□□□ 0.02
TRGV9Q99603 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV9Q99603 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV9Q99603 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRGV9Q99603 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV9Q99603 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.18■□□□□ 0.02
TRGV9Q99603 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV9Q99603 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV9Q99603 ZNF815P-204ENST00000434898 1737 ntBASIC15.17■□□□□ 0.02
TRGV9Q99603 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRGV9Q99603 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV9Q99603 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV9Q99603 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV9Q99603 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV9Q99603 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
TRGV9Q99603 AL161938.1-201ENST00000569833 2180 ntBASIC15.17■□□□□ 0.02
TRGV9Q99603 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV9Q99603 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV9Q99603 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV9Q99603 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms